5JVP

The neck-linker and alpha 7 helix of Homo sapiens CENP-E

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d5jvpf1	All alpha proteins	EB1 dimerisation domain-like	EB1 dimerisation domain-like	EB1 dimerisation domain-like	Microtubule-associated protein EB1, C-terminal dimerization domain	Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
F	d5jvpf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF03271	e5jvpA1	A: alpha duplicates or obligate multimers	X: EB1 dimerisation domain-like (From Topology)	H: EB1 dimerisation domain-like (From Topology)	T: EB1 dimerisation domain-like	F: PF03271	ECOD (1.6)
B	PF03271	e5jvpB1	A: alpha duplicates or obligate multimers	X: EB1 dimerisation domain-like (From Topology)	H: EB1 dimerisation domain-like (From Topology)	T: EB1 dimerisation domain-like	F: PF03271	ECOD (1.6)
C	PF03271	e5jvpC1	A: alpha duplicates or obligate multimers	X: EB1 dimerisation domain-like (From Topology)	H: EB1 dimerisation domain-like (From Topology)	T: EB1 dimerisation domain-like	F: PF03271	ECOD (1.6)
D	PF03271	e5jvpD1	A: alpha duplicates or obligate multimers	X: EB1 dimerisation domain-like (From Topology)	H: EB1 dimerisation domain-like (From Topology)	T: EB1 dimerisation domain-like	F: PF03271	ECOD (1.6)
E	PF03271	e5jvpE1	A: alpha duplicates or obligate multimers	X: EB1 dimerisation domain-like (From Topology)	H: EB1 dimerisation domain-like (From Topology)	T: EB1 dimerisation domain-like	F: PF03271	ECOD (1.6)
F	PF03271	e5jvpF1	A: alpha duplicates or obligate multimers	X: EB1 dimerisation domain-like (From Topology)	H: EB1 dimerisation domain-like (From Topology)	T: EB1 dimerisation domain-like	F: PF03271	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF03271	EB1-like C-terminal motif (EB1)	EB1-like C-terminal motif	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Chimera protein of Centromere-associated protein E and Microtubule-associated protein RP/EB family member 1	microtubule motor activity cytoskeletal motor activity ATP-dependent activity binding kinetochore binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding microtubule motor activity cytoskeletal motor activity ATP-dependent activity binding kinetochore binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cytoskeletal protein binding microtubule binding protein binding tubulin binding RNA binding nucleic acid binding kinase binding enzyme binding protein kinase binding cell adhesion molecule binding cadherin binding molecular adaptor activity microtubule plus-end binding identical protein binding	cellular process cell cycle mitotic cell cycle regulation of chromosome segregation regulation of cell cycle phase transition regulation of cellular process regulation of metaphase/anaphase transition of cell cycle regulation of cellular component organization cell cycle phase transition regulation of mitotic metaphase/anaphase transition cellular component organization regulation of mitotic cell cycle cellular component organization or biogenesis regulation of cell cycle cellular process cell cycle mitotic cell cycle regulation of chromosome segregation regulation of cell cycle phase transition regulation of cellular process regulation of metaphase/anaphase transition of cell cycle regulation of cellular component organization cell cycle phase transition regulation of mitotic metaphase/anaphase transition cellular component organization regulation of mitotic cell cycle cellular component organization or biogenesis regulation of cell cycle chromosome segregation cell cycle process regulation of biological process regulation of cell cycle process biological regulation chromosome organization sister chromatid segregation regulation of chromosome organization regulation of organelle organization regulation of mitotic cell cycle phase transition organelle organization mitotic cell cycle process regulation of sister chromatid segregation nuclear chromosome segregation metaphase/anaphase transition of mitotic cell cycle metaphase/anaphase transition of cell cycle mitotic cell cycle phase transition organelle assembly protein-containing complex organization non-membrane-bounded organelle assembly protein-DNA complex assembly cellular component biogenesis protein-DNA complex organization cellular component assembly kinetochore assembly protein-containing complex assembly kinetochore organization centromere complex assembly localization mitotic chromosome movement towards spindle pole chromosome localization organelle localization mitotic sister chromatid segregation chromosome movement towards spindle pole mitotic nuclear division organelle fission nuclear division microtubule-based movement microtubule-based process establishment of organelle localization cellular localization mitotic metaphase chromosome alignment metaphase chromosome alignment establishment of localization in cell attachment of spindle microtubules to kinetochore attachment of mitotic spindle microtubules to kinetochore establishment of localization establishment of chromosome localization cell division lateral attachment of mitotic spindle microtubules to kinetochore microtubule plus-end directed mitotic chromosome migration microtubule cytoskeleton organization mitotic spindle organization cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization positive regulation of phosphorylation regulation of catalytic activity regulation of transferase activity positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process phosphorus metabolic process protein modification process positive regulation of protein phosphorylation protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation cellular metabolic process regulation of protein metabolic process regulation of cellular metabolic process primary metabolic process regulation of molecular function positive regulation of kinase activity regulation of kinase activity macromolecule modification regulation of phosphorus metabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process positive regulation of cellular metabolic process positive regulation of molecular function positive regulation of protein modification process organic substance metabolic process protein metabolic process positive regulation of protein kinase activity positive regulation of cellular process organonitrogen compound metabolic process positive regulation of transferase activity positive regulation of catalytic activity regulation of protein kinase activity regulation of macromolecule metabolic process regulation of phosphorylation microtubule bundle formation protein localization cellular macromolecule localization macromolecule localization protein localization to microtubule cytoskeleton protein localization to microtubule organizing center protein localization to cytoskeleton protein localization to organelle protein localization to centrosome regulation of cytoskeleton organization regulation of microtubule polymerization or depolymerization negative regulation of biological process regulation of protein-containing complex assembly microtubule polymerization or depolymerization negative regulation of cellular process negative regulation of protein polymerization negative regulation of supramolecular fiber organization protein polymerization negative regulation of cellular component organization negative regulation of microtubule polymerization or depolymerization negative regulation of cytoskeleton organization regulation of microtubule-based process negative regulation of microtubule polymerization microtubule polymerization regulation of cellular component biogenesis negative regulation of protein-containing complex assembly negative regulation of organelle organization regulation of protein polymerization regulation of microtubule polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of microtubule cytoskeleton organization cell migration cell motility spindle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cilium assembly non-motile cilium assembly cilium organization cell projection assembly protein localization to astral microtubule protein localization to microtubule protein localization to cytoplasmic microtubule protein localization to spindle microtubule spindle localization establishment or maintenance of cell polarity establishment of mitotic spindle localization establishment of spindle localization establishment of spindle orientation establishment of cell polarity establishment of mitotic spindle orientation positive regulation of organelle organization positive regulation of cellular component organization positive regulation of protein-containing complex assembly positive regulation of protein polymerization positive regulation of microtubule polymerization or depolymerization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization positive regulation of supramolecular fiber organization positive regulation of microtubule polymerization	midbody cellular anatomical entity membrane intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle intracellular non-membrane-bounded organelle spindle midzone microtubule cytoskeleton non-membrane-bounded organelle cytoplasm cytosol midbody cellular anatomical entity membrane intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle intracellular non-membrane-bounded organelle spindle midzone microtubule cytoskeleton non-membrane-bounded organelle cytoplasm cytosol membrane-bounded organelle intracellular membrane-bounded organelle chromosome, centromeric region chromosome chromosomal region mitotic spindle intercellular bridge polymeric cytoskeletal fiber spindle microtubule kinetochore microtubule supramolecular fiber microtubule supramolecular polymer supramolecular complex kinetochore condensed chromosome, centromeric region condensed chromosome mitotic spindle midzone nucleus anchoring junction cell junction focal adhesion cell-substrate junction centrosome microtubule organizing center aster cytoplasmic microtubule mitotic spindle astral microtubule end microtubule end mitotic spindle astral microtubule astral microtubule microtubule plus-end cell periphery cell projection plasma membrane plasma membrane region cell projection membrane plasma membrane bounded cell projection Golgi apparatus endomembrane system cell cortex cortical cytoskeleton cortical microtubule cytoskeleton mitotic spindle pole spindle pole cilium ciliary basal body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR036961	Kinesin motor domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR001752	Kinesin motor domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR027640	Kinesin-like protein	Family
A, B, C, D, E A, B, C, D, E, F	IPR019821	Kinesin motor domain, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F	IPR001715	Calponin homology domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR004953	EB1, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F	IPR027328	Microtubule-associated protein RP/EB	Family
A, B, C, D, E A, B, C, D, E, F	IPR036133	EB1, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR036872	CH domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F	Pharos: Q15691	microcephaly 13, primary, autosomal recessive microcephaly Seckel syndrome testicular germ cell tumor pancreatic intraductal papillary-mucinous carcinoma primitive neuroectodermal tumor Sjogren syndrome adrenal cortex carcinoma breast cancer glioblastoma large cell medulloblastoma malignant colon neoplasm non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm psoriasis microcephaly 13, primary, autosomal recessive microcephaly Seckel syndrome testicular germ cell tumor pancreatic intraductal papillary-mucinous carcinoma primitive neuroectodermal tumor Sjogren syndrome adrenal cortex carcinoma breast cancer glioblastoma large cell medulloblastoma malignant colon neoplasm non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm psoriasis testicular cancer atopic eczema ductal breast carcinoma in situ hepatocellular carcinoma lung adenocarcinoma malignant glioma ovarian cancer Primary microcephaly atypical teratoid rhabdoid tumor endometriosis invasive ductal breast carcinoma lung cancer medulloblastoma nasopharyngeal carcinoma Weight Gain primitive neuroectodermal tumor astrocytic tumor coronary artery disease inflammatory bowel disease lymphoplasmacytic lymphoma medulloblastoma oligodendroglioma plasma cell myeloma atypical teratoid rhabdoid tumor dermatomyositis juvenile dermatomyositis malignant ependymoma myocardial ischemia osteosarcoma polycystic ovary syndrome breast carcinoma glioblastoma large cell medulloblastoma malignant glioma nicotine dependence ovarian cancer

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.