5IPI

Structure of Adeno-associated virus type 2 VLP


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
AB [auth 1]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
BB [auth 2]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
EB [auth 5]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
FB [auth 6]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
GB [auth 7]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
HB [auth 8]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
USCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
WA [auth w]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
XA [auth x]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
YA [auth y]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
ZA [auth z]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
CB [auth 3]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
DB [auth 4]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyssDNA viruses8041416 3000931 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AParvo_coate5ipiA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
AA [auth a]Parvo_coate5ipia1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
AB [auth 1]Parvo_coate5ipi11 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
BB [auth 2]Parvo_coate5ipi21 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
CA [auth c]Parvo_coate5ipic1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
DParvo_coate5ipiD1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
DA [auth d]Parvo_coate5ipid1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
EParvo_coate5ipiE1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
EA [auth e]Parvo_coate5ipie1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
EB [auth 5]Parvo_coate5ipi51 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
FB [auth 6]Parvo_coate5ipi61 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
GParvo_coate5ipiG1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
GA [auth g]Parvo_coate5ipig1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
GB [auth 7]Parvo_coate5ipi71 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
HParvo_coate5ipiH1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
HA [auth h]Parvo_coate5ipih1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
HB [auth 8]Parvo_coate5ipi81 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
IParvo_coate5ipiI1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
IA [auth i]Parvo_coate5ipii1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
JParvo_coate5ipiJ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
KParvo_coate5ipiK1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
KA [auth k]Parvo_coate5ipik1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
LParvo_coate5ipiL1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
LA [auth l]Parvo_coate5ipil1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
MParvo_coate5ipiM1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
MA [auth m]Parvo_coate5ipim1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
NParvo_coate5ipiN1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
OA [auth o]Parvo_coate5ipio1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
PA [auth p]Parvo_coate5ipip1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
QParvo_coate5ipiQ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
QA [auth q]Parvo_coate5ipiq1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
RParvo_coate5ipiR1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
RA [auth r]Parvo_coate5ipir1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
SParvo_coate5ipiS1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
UParvo_coate5ipiU1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
UA [auth u]Parvo_coate5ipiu1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
VParvo_coate5ipiV1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
WParvo_coate5ipiW1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
WA [auth w]Parvo_coate5ipiw1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
XA [auth x]Parvo_coate5ipix1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
YParvo_coate5ipiY1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
YA [auth y]Parvo_coate5ipiy1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
ZParvo_coate5ipiZ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
ZA [auth z]Parvo_coate5ipiz1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
BParvo_coate5ipiB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
BA [auth b]Parvo_coate5ipib1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
CParvo_coate5ipiC1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
CB [auth 3]Parvo_coate5ipi31 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
DB [auth 4]Parvo_coate5ipi41 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
FParvo_coate5ipiF1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
FA [auth f]Parvo_coate5ipif1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
JA [auth j]Parvo_coate5ipij1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
NA [auth n]Parvo_coate5ipin1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
OParvo_coate5ipiO1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
PParvo_coate5ipiP1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
SA [auth s]Parvo_coate5ipis1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
TParvo_coate5ipiT1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
TA [auth t]Parvo_coate5ipit1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
VA [auth v]Parvo_coate5ipiv1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)
XParvo_coate5ipiX1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Parvo_coatECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Capsid protein VP1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013607Phospholipase A2-like domainDomain
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily
IPR001403Parvovirus coat protein VP2Domain