5DUX
Crystal structure of the human galectin-4 N-terminal carbohydrate recognition domain in complex with 2'-fucosyllactose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d5duxb_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth D] | d5duxd_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth A] | d5duxa_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth C] | d5duxc_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF00337 | e5duxB1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00337 | ECOD (1.6) |
B [auth D] | PF00337 | e5duxD1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00337 | ECOD (1.6) |
C [auth A] | PF00337 | e5duxA1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00337 | ECOD (1.6) |
D [auth C] | PF00337 | e5duxC1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF00337 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
B [auth D] | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
C [auth A] | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
D [auth C] | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth D], C [auth A], D [auth C] | PF00337 | Galactoside-binding lectin (Gal-bind_lectin) | Galactoside-binding lectin | This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (Swiss:Q05315, EC:3.1.1.5). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth D], C [auth A], D [auth C] | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily |
A [auth B], B [auth D], C [auth A], D [auth C] | IPR044156 | Galectin-like | Family |
A [auth B], B [auth D], C [auth A], D [auth C] | IPR001079 | Galectin, carbohydrate recognition domain | Domain |