4YQX
Mouse IL-2 Bound to JES6-1 scFv Fragment
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | PF07686 | e4yqxH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth N] | PF07686 | e4yqxN1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth L] | PF07686 | e4yqxL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
E [auth O] | PF07686 | e4yqxO1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth A] | PF00715 | e4yqxA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: PF00715 | ECOD (1.6) |
F [auth M] | PF00715 | e4yqxM1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: PF00715 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth N] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E [auth O] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth A] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
F [auth M] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth H], D [auth N] | JES6-1 | VH | Rattus norvegicus (Norway rat) | IGHV1-8*01, IGHJ3*01 | V-DOMAIN VH | IG | SCFV-HEAVY-KAPPA | IMGT (202418-0) |
B [auth L], E [auth O] | JES6-1 | V-KAPPA | Rattus norvegicus (Norway rat) | IGKV8S9*01, IGKJ2-3*01, IGKJ2-1*01, IGKJ2-2*01 | V-DOMAIN V-KAPPA | IG | SCFV-HEAVY-KAPPA | IMGT (202418-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H], D [auth N] | Heavy Chain | IGHV1 | - | interleukin-2 | SAbDab (2024-05-10) |
B [auth L], E [auth O] | Light Chain | IGKV8 | Kappa | interleukin-2 | SAbDab (2024-05-10) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], F [auth M] | PF00715 | Interleukin 2 (IL2) | Interleukin 2 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], F [auth M] | IPR030477 | Interleukin-2, conserved site | Conserved Site |
C [auth A], F [auth M] | IPR000779 | Interleukin-2 | Family |
C [auth A], F [auth M] | IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |