Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4yn0b_ All alpha proteins STAT-like CAPPD, an extracellular domain of amyloid beta A4 protein automated matches automated matches Mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATNFR_c6e4yn0A2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFR_c6ECOD (1.6)
ATNFRSF11A_2nde4yn0A3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFRSF11A_2ndECOD (1.6)
ATNFRSF21e4yn0A4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFRSF21ECOD (1.6)
AUNK_F_TYPEe4yn0A1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: UNK_F_TYPEECOD (1.6)
BAPP_E2e4yn0B1 A: alpha bundlesX: STAT-likeH: CAPPD, an extracellular domain of amyloid beta A4 protein (From Topology)T: CAPPD, an extracellular domain of amyloid beta A4 proteinF: APP_E2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.10.50.10 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A domain 2CATH (4.3.0)
B1.20.120.770 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Amyloid precursor protein, E2 domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00020TNFR/NGFR cysteine-rich region (TNFR_c6)TNFR/NGFR cysteine-rich region- Domain
PF12925E2 domain of amyloid precursor protein (APP_E2)E2 domain of amyloid precursor proteinThe E2 domain is the largest of the conserved domains of the amyloid precursor protein. The structure of E2 consists of two coiled-coil sub-structures connected through a continuous helix, and bears an unexpected resemblance to the spectrin family of ...The E2 domain is the largest of the conserved domains of the amyloid precursor protein. The structure of E2 consists of two coiled-coil sub-structures connected through a continuous helix, and bears an unexpected resemblance to the spectrin family of protein structures.E 2 can reversibly dimerise in solution, and the dimerisation occurs along the longest dimension of the molecule in an antiparallel orientation, which enables the N-terminal substructure of one monomer to pack against the C-terminal substructure of a second monomer. The high degree of conservation of residues at the putative dimer interface suggests that the E2 dimer observed in the crystal could be physiologically relevant. Heparin sulfate proteoglycans, the putative ligands for the precursor present in extracellular matrix, bind to E2 at a conserved and positively charged site near the dimer interface [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tumor necrosis factor receptor superfamily member 21-
Amyloid beta A4 protein