4UJC

mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth BD]	Ribosomal_L5e	e4ujcBD1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L5e	ECOD (1.6)
K [auth BE]	Ribosomal_L6e	e4ujcBE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L6e	ECOD (1.6)
L [auth BF]	Ribosomal_L30_1	e4ujcBF1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30_1	ECOD (1.6)
M [auth BG]	Ribosomal_L7Ae_1	e4ujcBG1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae_1	ECOD (1.6)
N [auth BH]	Ribosomal_L6_2	e4ujcBH1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_2	ECOD (1.6)
N [auth BH]	Ribosomal_L6	e4ujcBH2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
O [auth BI]	Ribosomal_L16	e4ujcBI1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
P [auth BJ]	Ribosomal_L5_C	e4ujcBJ1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
Q [auth BL]	Ribosomal_L13e	e4ujcBL1	A: extended segments	X: RPL13 (From Topology)	H: RPL13 (From Topology)	T: RPL13	F: Ribosomal_L13e	ECOD (1.6)
R [auth BM]	Ribosomal_L14e	e4ujcBM1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L14e	ECOD (1.6)
S [auth BN]	Ribosomal_L15e	e4ujcBN1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L15e	ECOD (1.6)
B [auth AB]	GTP_EFTU_D2_2	e4ujcAB4	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: GTP_EFTU_D2_2	ECOD (1.6)
B [auth AB]	GTP_EFTU_D4	e4ujcAB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: GTP_EFTU_D4	ECOD (1.6)
B [auth AB]	MnmE_helical_2nd	e4ujcAB3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
B [auth AB]	IF-2	e4ujcAB2	A: a/b three-layered sandwiches	X: Initiation factor IF2/eIF5b, domain 3 (From Topology)	H: Initiation factor IF2/eIF5b, domain 3 (From Topology)	T: Initiation factor IF2/eIF5b, domain 3	F: IF-2	ECOD (1.6)
T [auth BO]	Ribosomal_L13	e4ujcBO1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
U [auth BP]	Ribosomal_L22	e4ujcBP1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
V [auth BQ]	Ribosomal_L18	e4ujcBQ1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L18	ECOD (1.6)
W [auth BR]	Ribosomal_L19e_N	e4ujcBR2	A: alpha arrays	X: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) N-terminal domain	F: Ribosomal_L19e_N	ECOD (1.6)
W [auth BR]	Ribosomal_L19e_C	e4ujcBR1	A: alpha bundles	X: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) C-terminal domain	F: Ribosomal_L19e_C	ECOD (1.6)
X [auth BS]	Ribosomal_L18A	e4ujcBS2	A: a+b two layers	X: GP2-like	H: RplX-like (From Topology)	T: RplX-like	F: Ribosomal_L18A	ECOD (1.6)
Y [auth BT]	Ribosomal_L21e	e4ujcBT1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L21e	ECOD (1.6)
Z [auth BU]	Ribosomal_L22e	e4ujcBU1	A: a+b two layers	X: Ribosomal protein L22e (From Topology)	H: Ribosomal protein L22e (From Topology)	T: Ribosomal protein L22e	F: Ribosomal_L22e	ECOD (1.6)
AA [auth BV]	Ribosomal_L14	e4ujcBV1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
BA [auth BW]	Ribosomal_L24e	e4ujcBW1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_L24e	ECOD (1.6)
CA [auth BX]	Ribosomal_L23_3	e4ujcBX1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_3	ECOD (1.6)
DA [auth BY]	Ribosomal_L26	e4ujcBY1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L26	ECOD (1.6)
EA [auth BZ]	Ribosomal_L27e	e4ujcBZ1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L27e	ECOD (1.6)
FA [auth Ba]	Ribosomal_L18	e4ujcBa1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L18	ECOD (1.6)
GA [auth Bb]	Ribosomal_L29e	e4ujcBb1	A: extended segments	X: RPL29 (From Topology)	H: RPL29 (From Topology)	T: RPL29	F: Ribosomal_L29e	ECOD (1.6)
HA [auth Bc]	Ribosomal_L7Ae	e4ujcBc1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
IA [auth Bd]	Ribosomal_L31e	e4ujcBd1	A: a+b two layers	X: Ribosomal protein L31e-like	H: Ribosomal protein L31e/gp120 outer domain (From Topology)	T: Ribosomal protein L31e/gp120 outer domain	F: Ribosomal_L31e	ECOD (1.6)
JA [auth Be]	Ribosomal_L32e	e4ujcBe1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L32e (From Topology)	T: Ribosomal protein L32e	F: Ribosomal_L32e	ECOD (1.6)
KA [auth Bf]	Ribosomal_L35Ae	e4ujcBf1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L35Ae	ECOD (1.6)
LA [auth Bg]	Ribosomal_L34e	e4ujcBg1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: RPL34 (From Topology)	T: RPL34	F: Ribosomal_L34e	ECOD (1.6)
MA [auth Bh]	Ribosomal_L29_2	e4ujcBh1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29_2	ECOD (1.6)
NA [auth Bi]	Ribosomal_L36e	e4ujcBi1	A: alpha arrays	X: 60S ribosomal protein rpL36 (L36e) (From Topology)	H: 60S ribosomal protein rpL36 (L36e) (From Topology)	T: 60S ribosomal protein rpL36 (L36e)	F: Ribosomal_L36e	ECOD (1.6)
OA [auth Bj]	Ribosomal_L37e	e4ujcBj1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L37e	ECOD (1.6)
PA [auth Bk]	Ribosomal_L38e	e4ujcBk1	A: a+b two layers	X: SRP9/14-like	H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)	T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related	F: Ribosomal_L38e	ECOD (1.6)
QA [auth Bl]	Ribosomal_L39	e4ujcBl1	A: extended segments	X: Ribosomal protein L39e (From Topology)	H: Ribosomal protein L39e (From Topology)	T: Ribosomal protein L39e	F: Ribosomal_L39	ECOD (1.6)
RA [auth Bm]	Ribosomal_L40e	e4ujcBm1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L40e	ECOD (1.6)
SA [auth Bn]	Ribosomal_L41	e4ujcBn1	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: Ribosomal_L41	ECOD (1.6)
TA [auth Bo]	Ribosomal_L44	e4ujcBo1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L44	ECOD (1.6)
UA [auth Bp]	Ribosomal_L37ae	e4ujcBp1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L37ae	ECOD (1.6)
VA [auth Bt]	Ribosomal_L28e	e4ujcBt1	A: a+b two layers	X: RPL28 (From Topology)	H: RPL28 (From Topology)	T: RPL28	F: Ribosomal_L28e	ECOD (1.6)
WA [auth Bu]	Ribosomal_L1_2nd_1	e4ujcBu1	A: a+b two layers	X: a+b domain in Ribosomal protein L1 (From Topology)	H: a+b domain in Ribosomal protein L1 (From Topology)	T: a+b domain in Ribosomal protein L1	F: Ribosomal_L1_2nd_1	ECOD (1.6)
WA [auth Bu]	Ribosomal_L1_1st_1	e4ujcBu2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Rossmann-like domain in Ribosomal protein L1 (From Topology)	T: Rossmann-like domain in Ribosomal protein L1	F: Ribosomal_L1_1st_1	ECOD (1.6)
YA [auth CA]	Ribosomal_S2_2	e4ujcCA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: Ribosomal_S2_2	ECOD (1.6)
ZA [auth CB]	Ribosomal_S3Ae_N	e4ujcCB2	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: Ribosomal_S3Ae_N	ECOD (1.6)
ZA [auth CB]	Ribosomal_S3Ae_C	e4ujcCB1	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: Ribosomal_S3Ae_C	ECOD (1.6)
AB [auth CC]	Ribosomal_S5_C_1	e4ujcCC2	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C_1	ECOD (1.6)
AB [auth CC]	Ribosomal_S5_3	e4ujcCC3	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: Ribosomal_S5_3	ECOD (1.6)
AB [auth CC]	Ribosomal_S5_2	e4ujcCC1	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: Ribosomal_S5_2	ECOD (1.6)
BB [auth CD]	Ribosomal_S3_C	e4ujcCD1	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: Ribosomal_S3_C	ECOD (1.6)
BB [auth CD]	KH_2_3	e4ujcCD2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: KH_2_3	ECOD (1.6)
CB [auth CE]	Ribosomal_S4e	e4ujcCE3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S4e	ECOD (1.6)
CB [auth CE]	40S_S4_C	e4ujcCE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: 40S_S4_C	ECOD (1.6)
CB [auth CE]	RS4NT	e4ujcCE2	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: RS4NT	ECOD (1.6)
DB [auth CF]	Ribosomal_S7_1	e4ujcCF1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: Ribosomal_S7_1	ECOD (1.6)
EB [auth CG]	Ribosomal_S6e	e4ujcCG1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_S6e	ECOD (1.6)
FB [auth CH]	Ribosomal_S7e_N	e4ujcCH2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_N	ECOD (1.6)
FB [auth CH]	Ribosomal_S7e_C_1	e4ujcCH1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_C_1	ECOD (1.6)
GB [auth CI]	Ribosomal_S8e	e4ujcCI1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_S8e	ECOD (1.6)
HB [auth CJ]	S4	e4ujcCJ1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: S4	ECOD (1.6)
IB [auth CK]	S10_plectin	e4ujcCK1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: S10_plectin	ECOD (1.6)
JB [auth CL]	Ribosomal_S17_1	e4ujcCL1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S17_1	ECOD (1.6)
KB [auth CM]	Ribosomal_L7Ae	e4ujcCM1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
LB [auth CN]	Ribosomal_S13_N	e4ujcCN2	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: Ribosomal_S13_N	ECOD (1.6)
LB [auth CN]	Ribosomal_S15_2	e4ujcCN1	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: Ribosomal_S15_2	ECOD (1.6)
MB [auth CO]	Ribosomal_S11	e4ujcCO1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_S11	ECOD (1.6)
NB [auth CP]	Ribosomal_S19	e4ujcCP1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: Ribosomal_S19	ECOD (1.6)
OB [auth CQ]	Ribosomal_S9	e4ujcCQ1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S9	ECOD (1.6)
PB [auth CR]	Ribosomal_S17e	e4ujcCR1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: Ribosomal_S17e	ECOD (1.6)
QB [auth CS]	Ribosomal_S13	e4ujcCS1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: Ribosomal_S13	ECOD (1.6)
G [auth BA]	Ribosomal_L2_1	e4ujcBA1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
G [auth BA]	Ribosomal_L2_C_2	e4ujcBA2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C_2	ECOD (1.6)
RB [auth CT]	Ribosomal_S19e	e4ujcCT1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S19e	ECOD (1.6)
SB [auth CU]	Ribosomal_S10_1	e4ujcCU1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: Ribosomal_S10_1	ECOD (1.6)
TB [auth CV]	Ribosomal_S21e	e4ujcCV1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: Ribosomal_S21e	ECOD (1.6)
UB [auth CW]	Ribosomal_S8_N_1	e4ujcCW2	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: Ribosomal_S8_N_1	ECOD (1.6)
UB [auth CW]	Ribosomal_S8_C_1	e4ujcCW1	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: Ribosomal_S8_C_1	ECOD (1.6)
VB [auth CX]	Ribosom_S12_S23	e4ujcCX1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosom_S12_S23	ECOD (1.6)
WB [auth CY]	Ribosomal_S24e	e4ujcCY1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_S24e	ECOD (1.6)
XB [auth CZ]	Ribosomal_S25	e4ujcCZ1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S25	ECOD (1.6)
YB [auth Ca]	Ribosomal_S26e	e4ujcCa1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S26e	ECOD (1.6)
ZB [auth Cb]	Ribosomal_S27e	e4ujcCb1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27e	ECOD (1.6)
AC [auth Cc]	Ribosomal_S28e	e4ujcCc1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S28e	ECOD (1.6)
H [auth BB]	Ribosomal_L3	e4ujcBB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
BC [auth Cd]	Ribosomal_S14_2	e4ujcCd1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S14_2	ECOD (1.6)
CC [auth Ce]	Ribosomal_S30	e4ujcCe1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: Ribosomal_S30	ECOD (1.6)
DC [auth Cf]	Ribosomal_S27	e4ujcCf1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27	ECOD (1.6)
EC [auth Cg]	DUF1899	e4ujcCg1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: DUF1899	ECOD (1.6)
I [auth BC]	Ribosomal_L4	e4ujcBC2	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
I [auth BC]	Ribos_L4_asso_C	e4ujcBC1	A: extended segments	X: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	T: C-terminal helical region in 60S ribosomal protein L4 (L4p)	F: Ribos_L4_asso_C	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth AB]	PF00009	Elongation factor Tu GTP binding domain (GTP_EFTU)	Elongation factor Tu GTP binding domain	This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.	Domain
B [auth AB]	PF14578	Elongation factor Tu domain 4 (GTP_EFTU_D4)	Elongation factor Tu domain 4	Elongation factor Tu consists of several structural domains, and this is usually the fourth.	Domain
B [auth AB]	PF11987	Translation-initiation factor 2 (IF-2)	Translation-initiation factor 2	IF-2 is a translation initiator in each of the three main phylogenetic domains (Eukaryotes [1], Bacteria [2] and Archaea [3]). IF2 interacts with formylmethionine-tRNA, GTP, IF1, IF3 and both ribosomal subunits [2]. Through these interactions, IF2 pr ...	IF-2 is a translation initiator in each of the three main phylogenetic domains (Eukaryotes [1], Bacteria [2] and Archaea [3]). IF2 interacts with formylmethionine-tRNA, GTP, IF1, IF3 and both ribosomal subunits [2]. Through these interactions, IF2 promotes the binding of the initiator tRNA to the A site in the smaller ribosomal subunit and catalyses the hydrolysis of GTP following initiation-complex formation [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AA]	TRNA	-	-	-
J [auth BD]	60S RIBOSOMAL PROTEIN L5	-	-	-
K [auth BE]	60S RIBOSOMAL PROTEIN L6	-	-	-
L [auth BF]	60S RIBOSOMAL PROTEIN L7	-	-	-
M [auth BG]	60S RIBOSOMAL PROTEIN L7A	-	-	-
N [auth BH]	60S RIBOSOMAL PROTEIN L9	-	-	-
O [auth BI]	60S RIBOSOMAL PROTEIN L10	-	-	-
P [auth BJ]	60S RIBOSOMAL PROTEIN L11	-	-	-
Q [auth BL]	60S RIBOSOMAL PROTEIN L13	-	-	-
R [auth BM]	60S RIBOSOMAL PROTEIN L14	-	-	-
S [auth BN]	60S RIBOSOMAL PROTEIN L15	-	-	-
B [auth AB]	EIF5B	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding nucleic acid binding translation initiation factor activity translation factor activity, RNA binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	-	-
T [auth BO]	60S RIBOSOMAL PROTEIN L13A	-	-	-
U [auth BP]	60S RIBOSOMAL PROTEIN L17	-	-	-
V [auth BQ]	60S RIBOSOMAL PROTEIN L18	-	-	-
W [auth BR]	60S RIBOSOMAL PROTEIN L19	-	-	-
X [auth BS]	60S RIBOSOMAL PROTEIN L18A	-	-	-
Y [auth BT]	60S RIBOSOMAL PROTEIN L21	-	-	-
Z [auth BU]	60S RIBOSOMAL PROTEIN L22	-	-	-
AA [auth BV]	60S RIBOSOMAL PROTEIN L23	-	-	-
BA [auth BW]	60S RIBOSOMAL PROTEIN L24	-	-	-
CA [auth BX]	60S RIBOSOMAL PROTEIN L23A	-	-	-
C [auth AC]	HCV-IRES	-	-	-
DA [auth BY]	60S RIBOSOMAL PROTEIN L26	-	-	-
EA [auth BZ]	60S RIBOSOMAL PROTEIN L27	-	-	-
FA [auth Ba]	60S RIBOSOMAL PROTEIN L27A	-	-	-
GA [auth Bb]	60S RIBOSOMAL PROTEIN L29	-	-	-
HA [auth Bc]	60S RIBOSOMAL PROTEIN L30	-	-	-
IA [auth Bd]	60S RIBOSOMAL PROTEIN L31	-	-	-
JA [auth Be]	60S RIBOSOMAL PROTEIN L32	-	-	-
KA [auth Bf]	60S RIBOSOMAL PROTEIN L35A	-	-	-
LA [auth Bg]	60S RIBOSOMAL PROTEIN L34	-	-	-
MA [auth Bh]	60S RIBOSOMAL PROTEIN UL29	-	-	-
D [auth A2]	28S RIBOSOMAL RNA	-	-	-
NA [auth Bi]	60S RIBOSOMAL PROTEIN L36	-	-	-
OA [auth Bj]	60S RIBOSOMAL PROTEIN L37	-	-	-
PA [auth Bk]	60S RIBOSOMAL PROTEIN L38	-	-	-
QA [auth Bl]	60S RIBOSOMAL PROTEIN L39	-	-	-
RA [auth Bm]	UBIQUITIN-60S RIBOSOMAL PROTEIN L40	-	-	-
SA [auth Bn]	60S RIBOSOMAL PROTEIN L41	-	-	-
TA [auth Bo]	60S RIBOSOMAL PROTEIN L36A	-	-	-
UA [auth Bp]	60S RIBOSOMAL PROTEIN L37A	-	-	-
VA [auth Bt]	60S RIBOSOMAL PROTEIN L28	-	-	-
WA [auth Bu]	60S RIBOSOMAL PROTEIN L10A	-	-	-
E [auth A3]	5.8S RIBOSOMAL RNA	-	-	-
XA [auth C1]	18S RIBOSOMAL RNA	-	-	-
YA [auth CA]	40S RIBOSOMAL PROTEIN US2	-	-	-
ZA [auth CB]	40S RIBOSOMAL PROTEIN ES1	-	-	-
AB [auth CC]	40S RIBOSOMAL PROTEIN US5	-	-	-
BB [auth CD]	40S RIBOSOMAL PROTEIN US3	-	-	-
CB [auth CE]	40S RIBOSOMAL PROTEIN ES4	-	-	-
DB [auth CF]	40S RIBOSOMAL PROTEIN US7	-	-	-
EB [auth CG]	40S RIBOSOMAL PROTEIN ES6	-	-	-
FB [auth CH]	40S RIBOSOMAL PROTEIN ES7	-	-	-
GB [auth CI]	40S RIBOSOMAL PROTEIN ES8	-	-	-
F [auth A4]	5S RIBOSOMAL RNA	-	-	-
HB [auth CJ]	40S RIBOSOMAL PROTEIN US4	-	-	-
IB [auth CK]	40S RIBOSOMAL PROTEIN ES10	-	-	-
JB [auth CL]	40S RIBOSOMAL PROTEIN US17	-	-	-
KB [auth CM]	40S RIBOSOMAL PROTEIN ES12	-	-	-
LB [auth CN]	40S RIBOSOMAL PROTEIN US15	-	-	-
MB [auth CO]	40S RIBOSOMAL PROTEIN US11	-	-	-
NB [auth CP]	40S RIBOSOMAL PROTEIN US19	-	-	-
OB [auth CQ]	40S RIBOSOMAL PROTEIN US9	-	-	-
PB [auth CR]	40S RIBOSOMAL PROTEIN ES17	-	-	-
QB [auth CS]	40S RIBOSOMAL PROTEIN US13	-	-	-
G [auth BA]	60S RIBOSOMAL PROTEIN L8	-	-	-
RB [auth CT]	40S RIBOSOMAL PROTEIN ES19	-	-	-
SB [auth CU]	40S RIBOSOMAL PROTEIN US10	-	-	-
TB [auth CV]	40S RIBOSOMAL PROTEIN ES21	-	-	-
UB [auth CW]	40S RIBOSOMAL PROTEIN US8	-	-	-
VB [auth CX]	40S RIBOSOMAL PROTEIN US12	-	-	-
WB [auth CY]	40S RIBOSOMAL PROTEIN ES24	-	-	-
XB [auth CZ]	40S RIBOSOMAL PROTEIN ES25	-	-	-
YB [auth Ca]	40S RIBOSOMAL PROTEIN ES26	-	-	-
ZB [auth Cb]	40S RIBOSOMAL PROTEIN ES27	-	-	-
AC [auth Cc]	40S RIBOSOMAL PROTEIN ES28	-	-	-
H [auth BB]	60S RIBOSOMAL PROTEIN L3	-	-	-
BC [auth Cd]	40S RIBOSOMAL PROTEIN US14	-	-	-
CC [auth Ce]	40S RIBOSOMAL PROTEIN ES30	-	-	-
DC [auth Cf]	40S RIBOSOMAL PROTEIN ES31	-	-	-
EC [auth Cg]	40S RIBOSOMAL PROTEIN RACK1	-	-	-
I [auth BC]	60S RIBOSOMAL PROTEIN L4	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth AB]	IPR029459	Elongation factor Tu-type domain	Domain
B [auth AB]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
B [auth AB]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
B [auth AB]	IPR005225	Small GTP-binding protein domain	Domain
B [auth AB]	IPR015760	Translation initiation factor IF- 2	Family
B [auth AB]	IPR036925	Translation initiation factor IF-2, domain 3 superfamily	Homologous Superfamily
B [auth AB]	IPR023115	Translation initiation factor IF- 2, domain 3	Domain
B [auth AB]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily