4QEY
Crystal structure of a DUF4425 family protein (BACOVA_05332) from Bacteroides ovatus ATCC 8483 at 2.52 A resolution
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Bacterial Ca2+-binding lipoprotein-like | 8050028 | 4006732 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Bacterial Ca2+-binding lipoprotein-like | 8052861 | 3002148 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PLCC | e4qeyA1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
B | PLCC | e4qeyB1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
C | PLCC | e4qeyC1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
D | PLCC | e4qeyD1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
E | PLCC | e4qeyE1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
F | PLCC | e4qeyF1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
G | PLCC | e4qeyG1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
H | PLCC | e4qeyH1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
I | PLCC | e4qeyI1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
J | PLCC | e4qeyJ1 | A: beta sandwiches | X: jelly-roll | H: DUF4425 (From Topology) | T: DUF4425 | F: PLCC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
B | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
C | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
D | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
E | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
F | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
G | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
H | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
I | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) | |
J | 2.60.60.60 | Mainly Beta | Sandwich | Lipoxygenase-1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14466 | PLAT/LH2 and C2-like Ca2+-binding lipoprotein (PLCC) | PLAT/LH2 and C2-like Ca2+-binding lipoprotein | A small family of bacterial proteins, found in several Bacteroides species. Structure determination (NMR and Xray) shows an immunoglobulin beta-barrel fold. Multiple homologues have been found in human gut metagenomics data sets. Structural experime ... | Domain |