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Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution External Resource: Annotation Domain Annotation: SCOP2 Classification SCOP2 Database Homepage Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A SCOP2 Family BF1418 N-terminal domain-like 8045276 4004386 SCOP2 (2022-06-29) A SCOP2 Family alpha-Amylases C-terminal beta-sheet domain 8089942 4002636 SCOP2 (2022-06-29) A SCOP2 Family Amylase catalytic domain 8089940 4003138 SCOP2 (2022-06-29) A SCOP2 Superfamily E set domains 8089939 3000070 SCOP2 (2022-06-29) A SCOP2 Superfamily Glycosyl hydrolase domain-like 8089943 3001528 SCOP2 (2022-06-29) A SCOP2 Superfamily (Trans)glycosidases 8089941 3000313 SCOP2 (2022-06-29) B SCOP2B Superfamily (Trans)glycosidases 8089941 3000313 SCOP2B (2022-06-29) B SCOP2B Superfamily Glycosyl hydrolase domain-like 8089943 3001528 SCOP2B (2022-06-29) B SCOP2B Superfamily E set domains 8089939 3000070 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A PF05345 e4ogzA1 A: beta sandwiches X: Immunoglobulin-like beta-sandwich H: Immunoglobulin-related T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like F: PF05345 ECOD (1.6) A PF17801 e4ogzA3 A: beta sandwiches X: Glycosyl hydrolase domain-like H: Glycosyl hydrolase domain (From Topology) T: Glycosyl hydrolase domain F: PF17801 ECOD (1.6) A PF16499 e4ogzA2 A: a/b barrels X: TIM beta/alpha-barrel H: TIM barrels (From Topology) T: TIM barrels F: PF16499 ECOD (1.6) B PF05345 e4ogzB1 A: beta sandwiches X: Immunoglobulin-like beta-sandwich H: Immunoglobulin-related T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like F: PF05345 ECOD (1.6) B PF17801 e4ogzB5 A: beta sandwiches X: Glycosyl hydrolase domain-like H: Glycosyl hydrolase domain (From Topology) T: Glycosyl hydrolase domain F: PF17801 ECOD (1.6) B PF16499 e4ogzB4 A: a/b barrels X: TIM beta/alpha-barrel H: TIM barrels (From Topology) T: TIM barrels F: PF16499 ECOD (1.6)
Chains Accession Name Description Comments Source PF16499 Alpha galactosidase A (Melibiase_2) Alpha galactosidase A - Family PF05345 Putative Ig domain (He_PIG) Putative Ig domain This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (Pfam:PF02494) and (Pfam:PF00801) suggest an Ig-like fold (personal obs:C. Yeats). S ... This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (Pfam:PF02494) and (Pfam:PF00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (Pfam:PF02639) and (Pfam:PF02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei ([1]). Less Domain PF17801 Alpha galactosidase C-terminal beta sandwich domain (Melibiase_C) Alpha galactosidase C-terminal beta sandwich domain This domain is found at the C-terminus of alpha galactosidase enzymes. Domain
Chains Polymer Molecular Function Biological Process Cellular Component Putative alpha-galactosidase/melibiase -