4LP5
Crystal structure of the full-length human RAGE extracellular domain (VC1C2 fragment)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | F_UNCLASSIFIED | e4lp5B6 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth B] | PF08205 | e4lp5B5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08205 | ECOD (1.6) |
B [auth A] | PF08205 | e4lp5A9 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08205 | ECOD (1.6) |
B [auth A] | PF13895 | e4lp5A8 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF13895 | ECOD (1.6) |
B [auth A] | PF13927 | e4lp5A7 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF13927 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B [auth A] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth B], B [auth A] | AGER( Advanced glycosylation end product-specific receptor) | 1V-1C-1C-LIKE | Homo sapiens (human) | AGER*01 | V-LIKE-DOMAIN V-LIKE, C-LIKE-DOMAIN C-LIKE | RPI | (1V-1C-1C-LIKE) | IMGT (202416-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF13927 | Immunoglobulin domain (Ig_3) | Immunoglobulin domain | This family contains immunoglobulin-like domains. | Domain |
A [auth B], B [auth A] | PF00047 | Immunoglobulin domain (ig) | Immunoglobulin domain | Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prot ... | Domain |
A [auth B], B [auth A] | PF08205 | CD80-like C2-set immunoglobulin domain (C2-set_2) | CD80-like C2-set immunoglobulin domain | These domains belong to the immunoglobulin superfamily. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR003006 | Immunoglobulin/major histocompatibility complex, conserved site | Conserved Site |
A [auth B], B [auth A] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth B], B [auth A] | IPR013151 | Immunoglobulin | Domain |
A [auth B], B [auth A] | IPR007110 | Immunoglobulin-like domain | Domain |
A [auth B], B [auth A] | IPR003599 | Immunoglobulin subtype | Domain |
A [auth B], B [auth A] | IPR003598 | Immunoglobulin subtype 2 | Domain |
A [auth B], B [auth A] | IPR013162 | CD80-like, immunoglobulin C2-set | Domain |