4L8K
Crystal structure of a putative peptidase (PARMER_02772) from Parabacteroides merdae ATCC 43184 at 2.26 A resolution
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF14684 | e4l8kA2 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: PF14684 | ECOD (1.6) |
A | PF03572 | e4l8kA1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF03572 | ECOD (1.6) |
B | PF14684 | e4l8kB4 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: PF14684 | ECOD (1.6) |
B | PF03572 | e4l8kB3 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF03572 | ECOD (1.6) |
C | PF14684 | e4l8kC4 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: PF14684 | ECOD (1.6) |
C | PF03572 | e4l8kC3 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF03572 | ECOD (1.6) |
D | PF14684 | e4l8kD4 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: PF14684 | ECOD (1.6) |
D | PF03572 | e4l8kD3 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF03572 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.750.44 | Alpha Beta | 2-Layer Sandwich | Transcription Regulator spoIIAA | CATH (4.3.0) | |
A | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
B | 3.30.750.44 | Alpha Beta | 2-Layer Sandwich | Transcription Regulator spoIIAA | CATH (4.3.0) | |
B | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
C | 3.30.750.44 | Alpha Beta | 2-Layer Sandwich | Transcription Regulator spoIIAA | CATH (4.3.0) | |
C | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
D | 3.30.750.44 | Alpha Beta | 2-Layer Sandwich | Transcription Regulator spoIIAA | CATH (4.3.0) | |
D | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03572 | Peptidase family S41 (Peptidase_S41) | Peptidase family S41 | - | Family | |
PF14684 | Tricorn protease C1 domain (Tricorn_C1) | Tricorn protease C1 domain | This domain is the C1 core domain of tricorn protease. This is a mixed alpha-beta domain [1]. | Domain |