Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4kxzb_ Small proteins Cystine-knot cytokines Cystine-knot cytokines Transforming growth factor (TGF)-beta TGF-beta2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad4kxza_ Small proteins Cystine-knot cytokines Cystine-knot cytokines Transforming growth factor (TGF)-beta TGF-beta2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth D]d4kxzd_ Small proteins Cystine-knot cytokines Cystine-knot cytokines Transforming growth factor (TGF)-beta TGF-beta2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth E]d4kxze_ Small proteins Cystine-knot cytokines Cystine-knot cytokines Transforming growth factor (TGF)-beta TGF-beta2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id4kxzi1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id4kxzi2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
K [auth M]d4kxzm1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
K [auth M]d4kxzm2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
L [auth P]d4kxzp1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
L [auth P]d4kxzp2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
J [auth L]d4kxzl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
J [auth L]d4kxzl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCystine-knot cytokines8038776 3000846 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCystine-knot cytokines8038776 3000846 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyCystine-knot cytokines8038776 3000846 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyCystine-knot cytokines8038776 3000846 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF00019e4kxzB1 A: few secondary structure elementsX: Cystine-knot cytokines (From Topology)H: Cystine-knot cytokines (From Topology)T: Cystine-knot cytokinesF: PF00019ECOD (1.6)
APF00019e4kxzA1 A: few secondary structure elementsX: Cystine-knot cytokines (From Topology)H: Cystine-knot cytokines (From Topology)T: Cystine-knot cytokinesF: PF00019ECOD (1.6)
C [auth D]PF00019e4kxzD1 A: few secondary structure elementsX: Cystine-knot cytokines (From Topology)H: Cystine-knot cytokines (From Topology)T: Cystine-knot cytokinesF: PF00019ECOD (1.6)
D [auth E]PF00019e4kxzE1 A: few secondary structure elementsX: Cystine-knot cytokines (From Topology)H: Cystine-knot cytokines (From Topology)T: Cystine-knot cytokinesF: PF00019ECOD (1.6)
E [auth H]PF07654e4kxzH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
E [auth H]PF07686e4kxzH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
H [auth Q]PF07654e4kxzQ2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
H [auth Q]PF07686e4kxzQ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
F [auth J]PF07654e4kxzJ2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
F [auth J]PF07686e4kxzJ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
G [auth N]PF07654e4kxzN2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
G [auth N]PF07686e4kxzN1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
IPF07654e4kxzI2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
IPF07686e4kxzI1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
K [auth M]PF07654e4kxzM2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
K [auth M]PF07686e4kxzM1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
L [auth P]PF07654e4kxzP2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
L [auth P]PF07686e4kxzP1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
J [auth L]PF07654e4kxzL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
J [auth L]PF07686e4kxzL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
E [auth H],
F [auth J],
G [auth N],
H [auth Q]
GC1008 VH-CH1 Homo sapiens (human) IGHV1-69*01, IGHV1-69*10, IGHV1-69*12, IGHV1-69*13, IGHV1-69D*01, IGHJ3*01, IGHJ3*02, IGHG4*01, IGHG4*04 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-4_KAPPA IMGT (202416-0)
I,
J [auth L],
K [auth M],
L [auth P]
GC1008 L-KAPPA Homo sapiens (human) IGKV3-20*01, IGKJ5*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-4_KAPPA IMGT (202416-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
E [auth H],
F [auth J],
G [auth N],
H [auth Q]
Heavy ChainIGHV1 -transforming growth factor beta-2SAbDab (2024-04-26)
I,
J [auth L],
K [auth M],
L [auth P]
Light ChainIGKV3 Kappatransforming growth factor beta-2SAbDab (2024-04-26)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
E [auth H],
F [auth J],
G [auth N],
H [auth Q]
Fresolimumab TGFBTherapeutic SAbDab (2024-04-26)
I,
J [auth L],
K [auth M],
L [auth P]
Fresolimumab TGFBTherapeutic SAbDab (2024-04-26)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C [auth D],
D [auth E]
PF00019Transforming growth factor beta like domain (TGF_beta)Transforming growth factor beta like domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C [auth D],
D [auth E]
Transforming growth factor beta-2
E [auth H],
F [auth J],
G [auth N],
H [auth Q]
GC1008 Heavy Chain---
I,
J [auth L],
K [auth M],
L [auth P]
GC1008 Light Chain---