4JO8
Crystal structure of the activating Ly49H receptor in complex with m157 (G1F strain)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | C1 set domains-like | 8103633 | 4000202 | SCOP2 (2022-06-29) |
A | SCOP2 Family | M157-like | 8046761 | 4005286 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Immunoglobulin (Ig) domain-like | 8103634 | 3000071 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MHC antigen-recognition domain | 8103632 | 3000521 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | M157_C | e4jo8A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: M157_C | ECOD (1.6) |
A | M157_N | e4jo8A1 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: M157_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.500.30 | Alpha Beta | 2-Layer Sandwich | Murine Class I Major Histocompatibility Complex, H2-DB | Chain A, domain 1 | CATH (4.3.0) |
A | 2.60.40.2530 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11624 | MHC class I-like protein M157 (M157) | MHC class I-like protein M157 | - | Family | |
PF08391 | Ly49-like protein, N-terminal region (Ly49) | Ly49-like protein, N-terminal region | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
M157 | - | - | - | |
Killer cell lectin-like receptor 8 |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR021073 | Murid herpesvirus 1, M157 | Family | |
IPR001304 | C-type lectin-like | Domain | |
IPR013600 | Ly49-like, N-terminal | Domain | |
IPR016186 | C-type lectin-like/link domain superfamily | Homologous Superfamily | |
IPR033992 | Natural killer cell receptor-like, C-type lectin-like domain | Domain | |
IPR016187 | C-type lectin fold | Homologous Superfamily |