4IDU
crystal structure of Schmallenberg virus nucleoprotein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Bunya_nucleocap | e4iduA1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
C | Bunya_nucleocap | e4iduC1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
D | Bunya_nucleocap | e4iduD1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
B | Bunya_nucleocap | e4iduB1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
A | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
C | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
C | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
D | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
D | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
B | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
B | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00952 | Bunyavirus nucleocapsid (N) protein (Bunya_nucleocap) | Bunyavirus nucleocapsid (N) protein | - | Family | |
PF00952 | Bunyavirus nucleocapsid (N) protein (Bunya_nucleocap) | Bunyavirus nucleocapsid (N) protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
SBV nucleoprotein | - | |||
SBV nucleoprotein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR043011 | Bunyavirus nucleocapsid (N) , C-terminal domain | Homologous Superfamily | |
IPR043012 | Bunyavirus nucleocapsid (N) , N-terminal domain | Homologous Superfamily | |
IPR001784 | Bunyavirus nucleocapsid (N) protein | Family | |
IPR043011 | Bunyavirus nucleocapsid (N) , C-terminal domain | Homologous Superfamily | |
IPR043012 | Bunyavirus nucleocapsid (N) , N-terminal domain | Homologous Superfamily | |
IPR001784 | Bunyavirus nucleocapsid (N) protein | Family |