4HTP
Crystal structure of the DBD domain of human DNA ligase IV bound to Artemis peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04675 | e4htpA5 | A: alpha bundles | X: ATP-dependent DNA ligase DNA-binding domain (From Topology) | H: ATP-dependent DNA ligase DNA-binding domain (From Topology) | T: ATP-dependent DNA ligase DNA-binding domain | F: PF04675 | ECOD (1.6) |
B | PF04675 | e4htpB2 | A: alpha bundles | X: ATP-dependent DNA ligase DNA-binding domain (From Topology) | H: ATP-dependent DNA ligase DNA-binding domain (From Topology) | T: ATP-dependent DNA ligase DNA-binding domain | F: PF04675 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.3260.10 | Mainly Alpha | Orthogonal Bundle | DNA ligase i, domain 1 | DNA ligase, ATP-dependent, N-terminal domain | CATH (4.3.0) |
B | 1.10.3260.10 | Mainly Alpha | Orthogonal Bundle | DNA ligase i, domain 1 | DNA ligase, ATP-dependent, N-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04675 | DNA ligase N terminus (DNA_ligase_A_N) | DNA ligase N terminus | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029710 | DNA ligase 4 | Family | |
IPR012310 | DNA ligase, ATP-dependent, central | Domain | |
IPR012308 | DNA ligase, ATP-dependent, N-terminal | Domain | |
IPR044125 | DNA Ligase 4, adenylation domain | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR021536 | DNA ligase IV domain | Domain | |
IPR036599 | DNA ligase, ATP-dependent, N-terminal domain superfamily | Homologous Superfamily | |
IPR001357 | BRCT domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR016059 | DNA ligase, ATP-dependent, conserved site | Conserved Site | |
IPR000977 | DNA ligase, ATP-dependent | Family | |
IPR012309 | DNA ligase, ATP-dependent, C-terminal | Domain | |
C, D [auth E] | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily |
C, D [auth E] | IPR011084 | DNA repair metallo-beta-lactamase | Domain |