4H9D

Crystal Structure of Mn-dependent Gme HNH nicking endonuclease from Geobacter metallireducens GS-15, Northeast Structural Genomics Consortium (NESG) Target GmR87

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF01844e4h9dB1 A: few secondary structure elementsX: His-Me finger endonucleases (From Homology)H: His-Me finger endonucleasesT: His-Me finger endonucleasesF: PF01844ECOD (1.6)
CPF01844e4h9dC1 A: few secondary structure elementsX: His-Me finger endonucleases (From Homology)H: His-Me finger endonucleasesT: His-Me finger endonucleasesF: PF01844ECOD (1.6)
APF01844e4h9dA1 A: few secondary structure elementsX: His-Me finger endonucleases (From Homology)H: His-Me finger endonucleasesT: His-Me finger endonucleasesF: PF01844ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.30.50 Mainly Alpha Orthogonal Bundle DNA Binding (I), subunit A CATH (4.3.0)
C1.10.30.50 Mainly Alpha Orthogonal Bundle DNA Binding (I), subunit A CATH (4.3.0)
A1.10.30.50 Mainly Alpha Orthogonal Bundle DNA Binding (I), subunit A CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF14279HNH endonuclease (HNH_5)HNH endonucleaseThis domain is related to other HNH domain families such as Pfam:PF01844. Suggesting that these proteins have a nucleic acid cleaving function.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
HNH endonuclease - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR029471HNH endonuclease 5Domain
A, B, C
IPR003615HNH nucleaseDomain