4GKF
Crystal structure and characterization of Cmr5 protein from Pyrococcus furiosus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4gkfa_ | All alpha proteins | ATPD N-terminal domain-like | AF1862-like | automated matches | automated matches | (Pyrococcus furiosus DSM 3638 ) [TaxId: 186497 ], | SCOPe (2.08) |
B | d4gkfb_ | All alpha proteins | ATPD N-terminal domain-like | AF1862-like | automated matches | automated matches | (Pyrococcus furiosus DSM 3638 ) [TaxId: 186497 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cas_Cmr5 | e4gkfA2 | A: alpha bundles | X: ATPD N-terminal domain-like | H: Cas Cmr5-like (From Topology) | T: Cas Cmr5-like | F: Cas_Cmr5 | ECOD (1.6) |
B | Cas_Cmr5 | e4gkfB1 | A: alpha bundles | X: ATPD N-terminal domain-like | H: Cas Cmr5-like (From Topology) | T: Cas Cmr5-like | F: Cas_Cmr5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.520.30 | Mainly Alpha | Orthogonal Bundle | Peroxidase | domain 1 | CATH (4.3.0) |
B | 1.10.520.30 | Mainly Alpha | Orthogonal Bundle | Peroxidase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09701 | CRISPR-associated protein (Cas_Cmr5) (Cas_Cmr5) | CRISPR-associated protein (Cas_Cmr5) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
CRISPR system Cmr subunit Cmr5 | - |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010160 | CRISPR-associated protein, Cmr5 | Family | |
IPR023101 | AF1862-like domain superfamily | Homologous Superfamily |