4FXX
Structure of SF1 coiled-coil domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SF1 HH domain-like | 8089885 | 3002399 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SF1 HH domain-like | 8089885 | 3002399 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | SF1 HH domain-like | 8089885 | 3002399 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SF1 HH domain-like | 8089885 | 3002399 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SF1-HH | e4fxxA1 | A: extended segments | X: Splicing factor 1 N-terminal domain (From Topology) | H: Splicing factor 1 N-terminal domain (From Topology) | T: Splicing factor 1 N-terminal domain | F: SF1-HH | ECOD (1.6) |
B | SF1-HH | e4fxxB3 | A: extended segments | X: Splicing factor 1 N-terminal domain (From Topology) | H: Splicing factor 1 N-terminal domain (From Topology) | T: Splicing factor 1 N-terminal domain | F: SF1-HH | ECOD (1.6) |
C | SF1-HH | e4fxxC3 | A: extended segments | X: Splicing factor 1 N-terminal domain (From Topology) | H: Splicing factor 1 N-terminal domain (From Topology) | T: Splicing factor 1 N-terminal domain | F: SF1-HH | ECOD (1.6) |
D | SF1-HH | e4fxxD1 | A: extended segments | X: Splicing factor 1 N-terminal domain (From Topology) | H: Splicing factor 1 N-terminal domain (From Topology) | T: Splicing factor 1 N-terminal domain | F: SF1-HH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 6.10.140.1790 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
C | 6.10.140.1790 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16275 | Splicing factor 1 helix-hairpin domain (SF1-HH) | Splicing factor 1 helix-hairpin domain | This domain, approximately 100 residues in length, is mainly found in splicing factor 1 from yeast to human [1]. It is a helix-hairpin domain, which forms a secondary, hydrophobic interface with U2AF65(UHM) to lock the orientation of the two subunit ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR032570 | Splicing factor 1, helix-hairpin domain | Domain | |
IPR004087 | K Homology domain | Domain | |
IPR001878 | Zinc finger, CCHC-type | Domain | |
IPR036612 | K Homology domain, type 1 superfamily | Homologous Superfamily | |
IPR045071 | KH domain-containing BBP-like | Family | |
IPR047086 | Splicing factor 1, helix-hairpin domain superfamily | Homologous Superfamily | |
IPR004088 | K Homology domain, type 1 | Domain |