Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth A]SCOP2B Superfamilymu adaptin domain-like8083652 3000810 SCOP2B (2022-06-29)
F [auth M]SCOP2B Superfamilymu adaptin domain-like8083652 3000810 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth C]PF00469e4emzC2 A: a+b three layersX: Regulatory factor Nef (From Topology)H: Regulatory factor Nef (From Topology)T: Regulatory factor NefF: PF00469ECOD (1.6)
D [auth B]PF00469e4emzB2 A: a+b three layersX: Regulatory factor Nef (From Topology)H: Regulatory factor Nef (From Topology)T: Regulatory factor NefF: PF00469ECOD (1.6)
E [auth A]PF00928e4emzA3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF00928ECOD (1.6)
F [auth M]PF00928e4emzM3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF00928ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth C],
D [auth B]
PF00469Negative factor, (F-Protein) or Nef (F-protein)Negative factor, (F-Protein) or Nef- Family
B [auth D],
C [auth E]
PF06623MHC_I C-terminus (MHC_I_C)MHC_I C-terminus- Family
E [auth A],
F [auth M]
PF00928Adaptor complexes medium subunit family (Adap_comp_sub)Adaptor complexes medium subunit family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C],
D [auth B]
Protein Nef
B [auth D],
C [auth E]
MHC-I
E [auth A],
F [auth M]
AP-1 complex subunit mu-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C],
D [auth B]
IPR001558HIV negative factor NefFamily
A [auth C],
D [auth B]
IPR027481HIV-1 Nef protein, core domain superfamilyHomologous Superfamily
A [auth C],
D [auth B]
IPR027480HIV-1 Nef protein, anchor domain superfamilyHomologous Superfamily
B [auth D],
C [auth E]
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B [auth D],
C [auth E]
IPR010579MHC class I, alpha chain, C-terminalDomain
B [auth D],
C [auth E]
IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
B [auth D],
C [auth E]
IPR001039MHC class I alpha chain, alpha1 alpha2 domainsDomain
B [auth D],
C [auth E]
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
B [auth D],
C [auth E]
IPR013783Immunoglobulin-like foldHomologous Superfamily
B [auth D],
C [auth E]
IPR007110Immunoglobulin-like domainDomain
B [auth D],
C [auth E]
IPR003597Immunoglobulin C1-setDomain
B [auth D],
C [auth E]
IPR011161MHC class I-like antigen recognition-likeDomain
B [auth D],
C [auth E]
IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily
E [auth A],
F [auth M]
IPR011012Longin-like domain superfamilyHomologous Superfamily
E [auth A],
F [auth M]
IPR022775AP complex, mu/sigma subunitDomain
E [auth A],
F [auth M]
IPR036168AP-2 complex subunit mu, C-terminal superfamilyHomologous Superfamily
E [auth A],
F [auth M]
IPR028565Mu homology domainDomain
E [auth A],
F [auth M]
IPR018240Clathrin adaptor, mu subunit, conserved siteConserved Site
E [auth A],
F [auth M]
IPR001392Clathrin adaptor, mu subunitFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth D],
C [auth E]
PharosP04439