4AMX
CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF21365 | e4amxB3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4amxB2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e4amxB4 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF01055 | e4amxB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
D | PF21365 | e4amxD3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
D | F_UNCLASSIFIED | e4amxD2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e4amxD4 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF01055 | e4amxD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
A | PF21365 | e4amxA3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
A | F_UNCLASSIFIED | e4amxA2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e4amxA4 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF01055 | e4amxA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
C | PF21365 | e4amxC3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
C | F_UNCLASSIFIED | e4amxC2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e4amxC4 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF01055 | e4amxC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.40.1760 | Mainly Beta | Sandwich | Immunoglobulin-like | glycosyl hydrolase (family 31) | CATH (4.3.0) |
B | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
D | 2.60.40.1760 | Mainly Beta | Sandwich | Immunoglobulin-like | glycosyl hydrolase (family 31) | CATH (4.3.0) |
D | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
A | 2.60.40.1760 | Mainly Beta | Sandwich | Immunoglobulin-like | glycosyl hydrolase (family 31) | CATH (4.3.0) |
A | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
C | 2.60.40.1760 | Mainly Beta | Sandwich | Immunoglobulin-like | glycosyl hydrolase (family 31) | CATH (4.3.0) |
C | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21365 | Glycosyl hydrolase family 31 C-terminal domain (Glyco_hydro_31_3rd) | Glycosyl hydrolase family 31 C-terminal domain | Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. This entry represents the 3rd beta sandwich domain. | Domain | |
PF01055 | Glycosyl hydrolases family 31 TIM-barrel domain (Glyco_hydro_31_2nd) | Glycosyl hydrolases family 31 TIM-barrel domain | Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. This entry corresponds to the second domain of family 31 enzymes and adopts a TIM-barrel fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
ALPHA-1,4-GLUCAN LYASE ISOZYME 1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000322 | Glycoside hydrolase family 31, TIM barrel domain | Domain | |
IPR048395 | Glycosyl hydrolase family 31, C-terminal domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
IPR011013 | Galactose mutarotase-like domain superfamily | Homologous Superfamily |