3VNN
Crystal Structure of a sub-domain of the nucleotidyltransferase (adenylation) domain of human DNA ligase IV
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.470.30 | Alpha Beta | 2-Layer Sandwich | D-amino Acid Aminotransferase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01068 | ATP dependent DNA ligase domain (DNA_ligase_A_M) | ATP dependent DNA ligase domain | This domain belongs to a more diverse superfamily, including Pfam:PF01331 and Pfam:PF01653 [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029710 | DNA ligase 4 | Family | |
IPR012310 | DNA ligase, ATP-dependent, central | Domain | |
IPR012308 | DNA ligase, ATP-dependent, N-terminal | Domain | |
IPR044125 | DNA Ligase 4, adenylation domain | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR021536 | DNA ligase IV domain | Domain | |
IPR036599 | DNA ligase, ATP-dependent, N-terminal domain superfamily | Homologous Superfamily | |
IPR001357 | BRCT domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR016059 | DNA ligase, ATP-dependent, conserved site | Conserved Site | |
IPR000977 | DNA ligase, ATP-dependent | Family | |
IPR012309 | DNA ligase, ATP-dependent, C-terminal | Domain |