3S6L
Crystal structure of a YadA-like head domain of the trimeric autotransporter adhesin BoaA from Burkholderia pseudomallei solved by iodide ion SAD phasing
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Adhesin YadA collagen-binding domain | 8079920 | 3000252 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Adhesin YadA collagen-binding domain | 8079919 | 4000961 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Adhesin YadA collagen-binding domain | 8079920 | 3000252 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Adhesin YadA collagen-binding domain | 8079920 | 3000252 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Adhesin YadA collagen-binding domain | 8079920 | 3000252 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Adhesin YadA collagen-binding domain | 8079920 | 3000252 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05658,PF05662 | e3s6lA1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Adhesin YadA, collagen-binding domain (From Topology) | T: Adhesin YadA, collagen-binding domain | F: PF05658,PF05662 | ECOD (1.6) |
B | PF05658,PF05662 | e3s6lB1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Adhesin YadA, collagen-binding domain (From Topology) | T: Adhesin YadA, collagen-binding domain | F: PF05658,PF05662 | ECOD (1.6) |
C | PF05658,PF05662 | e3s6lC1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Adhesin YadA, collagen-binding domain (From Topology) | T: Adhesin YadA, collagen-binding domain | F: PF05658,PF05662 | ECOD (1.6) |
D | PF05658,PF05662 | e3s6lD1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Adhesin YadA, collagen-binding domain (From Topology) | T: Adhesin YadA, collagen-binding domain | F: PF05658,PF05662 | ECOD (1.6) |
E | PF05658,PF05662 | e3s6lE1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Adhesin YadA, collagen-binding domain (From Topology) | T: Adhesin YadA, collagen-binding domain | F: PF05658,PF05662 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.150.10.10 | Mainly Beta | 2 Solenoid | Alkaline Protease, subunit P, domain 1 | Serralysin-like metalloprotease, C-terminal | CATH (4.3.0) |
B | 2.150.10.10 | Mainly Beta | 2 Solenoid | Alkaline Protease, subunit P, domain 1 | Serralysin-like metalloprotease, C-terminal | CATH (4.3.0) |
C | 2.150.10.10 | Mainly Beta | 2 Solenoid | Alkaline Protease, subunit P, domain 1 | Serralysin-like metalloprotease, C-terminal | CATH (4.3.0) |
D | 2.150.10.10 | Mainly Beta | 2 Solenoid | Alkaline Protease, subunit P, domain 1 | Serralysin-like metalloprotease, C-terminal | CATH (4.3.0) |
E | 2.150.10.10 | Mainly Beta | 2 Solenoid | Alkaline Protease, subunit P, domain 1 | Serralysin-like metalloprotease, C-terminal | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Hep_Hag family |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008635 | Trimeric autotransporter adhesin YadA-like, stalk domain | Domain | |
IPR008640 | Trimeric autotransporter adhesin YadA-like, head domain | Domain | |
IPR005594 | Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain | Domain | |
IPR011049 | Serralysin-like metalloprotease, C-terminal | Homologous Superfamily | |
IPR045584 | Pilin-like | Homologous Superfamily |