Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
QSCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
USCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
MSCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
YSCOP2B SuperfamilySNARE fusion complex8079907 3001549 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
NSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
RSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
VSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilySNARE fusion complex8043665 3001549 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
LSCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
HSCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
PSCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
TSCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
XSCOP2B SuperfamilySNARE fusion complex8044158 3001549 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilySNARE fusion complex8082799 3001549 SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
F1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
J1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
N1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
R1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
V1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
DA [auth d]1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
Z1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
AA [auth a]1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
C1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
EA [auth e]1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
K1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
S1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
W1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
G1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
O1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
BA [auth b]1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
D1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
FA [auth f]1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
L1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
H1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
P1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
T1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
X1.20.5.110 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
KA [auth k]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)
MA [auth m]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)
NA [auth n]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)
GA [auth g]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)
HA [auth h]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)
IA [auth i]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)
JA [auth j]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)
LA [auth l]1.20.5.580 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Helix binCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00957Synaptobrevin (Synaptobrevin)Synaptobrevin- Family
PF05739SNARE domain (SNARE)SNARE domain- Family
PF00804Syntaxin (Syntaxin)SyntaxinSyntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal d ...Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal domain that is featured in this entry. This domain varies between syntaxin isoforms; in syntaxin 1A (Swiss:O35526) it is found as three alpha-helices with a left-handed twist. It may fold back on the SNARE domain to allow the molecule to adopt a 'closed' configuration that prevents formation of the core fusion complex - it thus has an auto-inhibitory role. The function of syntaxins is determined by their localisation. They are involved in neuronal exocytosis, ER-Golgi transport and Golgi-endosome transport, for example. They also interact with other proteins as well as those involved in SNARE complexes. These include vesicle coat proteins, Rab GTPases, and tethering factors [6].
Domain
PF00835SNAP-25 family (SNAP-25)SNAP-25 family- Family
PF05835Synaphin protein (Synaphin)Synaphin protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Vesicle-associated membrane protein 2
Syntaxin-1A
Synaptosomal-associated protein 25
Synaptosomal-associated protein 25
Complexin-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR016444Synaptobrevin/Vesicle-associated membrane proteinFamily
IPR042855v-SNARE, coiled-coil homology domainDomain
IPR001388Synaptobrevin-likeFamily
IPR000727Target SNARE coiled-coil homology domainDomain
IPR006012Syntaxin/epimorphin, conserved siteConserved Site
IPR010989SNAREHomologous Superfamily
IPR006011Syntaxin, N-terminal domainDomain
IPR045242SyntaxinFamily
IPR000727Target SNARE coiled-coil homology domainDomain
IPR039077SNAP25, N-terminal SNARE motif, chordatesDomain
IPR000928SNAP-25 domainDomain
IPR000727Target SNARE coiled-coil homology domainDomain
IPR039077SNAP25, N-terminal SNARE motif, chordatesDomain
IPR000928SNAP-25 domainDomain
IPR008849SynaphinFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP63027
PharosP60880
PharosP60880
PharosO14810