3P3Y

Crystal structure of neurofascin homophilic adhesion complex in space group p6522

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF07679	e3p3yA3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07679	ECOD (1.6)
A	PF13927	e3p3yA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF13927	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13927	Immunoglobulin domain (Ig_3)	Immunoglobulin domain	This family contains immunoglobulin-like domains.	Domain
A	PF07679	Immunoglobulin I-set domain (I-set)	Immunoglobulin I-set domain	-	Domain
A	PF00047	Immunoglobulin domain (ig)	Immunoglobulin domain	Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prot ...	Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Neurofascin	cell adhesion molecule binding protein binding binding cell adhesion mediator activity cell-cell adhesion mediator activity	developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation cellular component organization or biogenesis plasma membrane bounded cell projection organization axon guidance axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron projection guidance neuron development cellular process peripheral nervous system development myelination axon ensheathment ensheathment of neurons cell adhesion cell-cell adhesion	anchoring junction cell junction cellular anatomical entity focal adhesion cell-substrate junction cell-cell junction paranodal junction axon cell projection main axon neuron projection node of Ranvier plasma membrane bounded cell projection membrane-bounded organelle anchoring junction cell junction cellular anatomical entity focal adhesion cell-substrate junction cell-cell junction paranodal junction axon cell projection main axon neuron projection node of Ranvier plasma membrane bounded cell projection membrane-bounded organelle intracellular anatomical structure ficolin-1-rich granule membrane membrane intracellular vesicle intracellular membrane-bounded organelle ficolin-1-rich granule endomembrane system tertiary granule intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle organelle membrane secretory granule membrane cell periphery plasma membrane axon initial segment

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A	IPR003599	Immunoglobulin subtype	Domain
A	IPR003598	Immunoglobulin subtype 2	Domain
A	IPR003961	Fibronectin type III	Domain
A	IPR026965	Neurofascin, immunoglobulin-like domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR026966	Neurofascin/L1/NrCAM, C-terminal domain	Domain
A	IPR013151	Immunoglobulin	Domain
A	IPR007110	Immunoglobulin-like domain	Domain
A	IPR013098	Immunoglobulin I-set	Domain
A	IPR036116	Fibronectin type III superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O94856	pancreatic intraductal papillary-mucinous neoplasm psoriasis atopic eczema breast cancer interstitial lung disease lung cancer malignant ependymoma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia schizophrenia attention deficit hyperactivity disorder, inattentive type breast carcinoma large cell medulloblastoma lung carcinoma pancreatic intraductal papillary-mucinous neoplasm psoriasis atopic eczema breast cancer interstitial lung disease lung cancer malignant ependymoma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia schizophrenia attention deficit hyperactivity disorder, inattentive type breast carcinoma large cell medulloblastoma lung carcinoma malignant glioma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma Pick disease atypical teratoid rhabdoid tumor cystic fibrosis lung adenocarcinoma malignant colon neoplasm medulloblastoma osteosarcoma

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.