Annotations: 3ON0

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Tra_M_N	e3on0A1	A: alpha arrays	X: HTH	H: DNA-binding domain of TraM protein (From Topology)	T: DNA-binding domain of TraM protein	F: Tra_M_N	ECOD (1.6)
A	Tra_M_C	e3on0A2	A: alpha duplicates or obligate multimers	X: TraM-like (From Topology)	H: TraM-like (From Topology)	T: TraM-like	F: Tra_M_C	ECOD (1.6)
B	Tra_M_N	e3on0B1	A: alpha arrays	X: HTH	H: DNA-binding domain of TraM protein (From Topology)	T: DNA-binding domain of TraM protein	F: Tra_M_N	ECOD (1.6)
B	Tra_M_C	e3on0B2	A: alpha duplicates or obligate multimers	X: TraM-like (From Topology)	H: TraM-like (From Topology)	T: TraM-like	F: Tra_M_C	ECOD (1.6)
C	Tra_M_N	e3on0C1	A: alpha arrays	X: HTH	H: DNA-binding domain of TraM protein (From Topology)	T: DNA-binding domain of TraM protein	F: Tra_M_N	ECOD (1.6)
C	Tra_M_C	e3on0C2	A: alpha duplicates or obligate multimers	X: TraM-like (From Topology)	H: TraM-like (From Topology)	T: TraM-like	F: Tra_M_C	ECOD (1.6)
D	Tra_M_N	e3on0D3	A: alpha arrays	X: HTH	H: DNA-binding domain of TraM protein (From Topology)	T: DNA-binding domain of TraM protein	F: Tra_M_N	ECOD (1.6)
D	Tra_M_C	e3on0D4	A: alpha duplicates or obligate multimers	X: TraM-like (From Topology)	H: TraM-like (From Topology)	T: TraM-like	F: Tra_M_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (utative)
A	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (utative)
B	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (4.3.0)
B	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
C	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (4.3.0)
C	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
D	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (4.3.0)
D	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF05261	TraM protein, DNA-binding (Tra_M)	TraM protein, DNA-binding	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Protein traM	DNA binding binding organic cyclic compound binding nucleic acid binding	-	intracellular anatomical structure cytoplasm cellular anatomical entity
E [auth P]	sbmA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR010992	Integration host factor (IHF)-like DNA-binding domain superfamily	Homologous Superfamily
A, B, C, D	IPR042073	TraM, DNA-binding domain	Homologous Superfamily
A, B, C, D	IPR007925	Relaxosome protein TraM	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.