3JXO

Crystal Structure of an Octomeric Two-Subunit TrkA K+ Channel Ring Gating Assembly, TM1088A:TM1088B, from Thermotoga maritima

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02080	e3jxoA1	A: a+b two layers	X: TrkA C-terminal domain-like (From Topology)	H: TrkA C-terminal domain-like (From Topology)	T: TrkA C-terminal domain-like	F: PF02080	ECOD (1.6)
B	PF02080	e3jxoB1	A: a+b two layers	X: TrkA C-terminal domain-like (From Topology)	H: TrkA C-terminal domain-like (From Topology)	T: TrkA C-terminal domain-like	F: PF02080	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.70.1450	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Regulator of K+ conductance, C-terminal domain	CATH (4.3.0)
B	3.30.70.1450	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Regulator of K+ conductance, C-terminal domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02080	TrkA-C domain (TrkA_C)	TrkA-C domain	This domain is often found next to the Pfam:PF02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand [1]. The domain is predicted to adopt an all beta structure [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	TrkA-N domain protein	monoatomic cation transmembrane transporter activity potassium ion transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity	-	cell periphery plasma membrane membrane cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR006037	Regulator of K+ conductance, C-terminal	Domain
A, B	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B	IPR036721	Regulator of K+ conductance, C-terminal domain superfamily	Homologous Superfamily
A, B	IPR006036	Potassium uptake protein TrkA	Family
A, B	IPR003148	Regulator of K+ conductance, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.