Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3it8a_ All beta proteins TNF-like TNF-like TNF-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd3it8b_ All beta proteins TNF-like TNF-like TNF-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd3it8c_ All beta proteins TNF-like TNF-like TNF-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd3it8g_ All beta proteins TNF-like TNF-like TNF-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd3it8h_ All beta proteins TNF-like TNF-like TNF-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id3it8i_ All beta proteins TNF-like TNF-like TNF-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyTNF-like8041219 3000061 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTNF-like8041219 3000061 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTNF-like8041219 3000061 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyTNF-like8041219 3000061 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyTNF-like8041219 3000061 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyTNF-like8041219 3000061 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATNFe3it8A1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: TNFECOD (1.6)
BTNFe3it8B1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: TNFECOD (1.6)
CTNFe3it8C1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: TNFECOD (1.6)
GTNFe3it8G1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: TNFECOD (1.6)
HTNFe3it8H1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: TNFECOD (1.6)
ITNFe3it8I1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: TNFECOD (1.6)
JC1-set_2e3it8J1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
JPHA02865e3it8J3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PHA02865ECOD (1.6)
DC1-set_2e3it8D4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
DPHA02865e3it8D3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PHA02865ECOD (1.6)
EC1-set_2e3it8E1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
EPHA02865e3it8E3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PHA02865ECOD (1.6)
FC1-set_2e3it8F1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
FPHA02865e3it8F3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PHA02865ECOD (1.6)
KC1-set_2e3it8K1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
KPHA02865e3it8K3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PHA02865ECOD (1.6)
LC1-set_2e3it8L1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_2ECOD (1.6)
LPHA02865e3it8L3 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PHA02865ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.40 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.40 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
C2.60.120.40 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
G2.60.120.40 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
H2.60.120.40 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
I2.60.120.40 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
J3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
J2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
F3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
F2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
K3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
L3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
L2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, B, C, G, H
TNFA (Tumor necrosis factor Alpha) TNF Homo sapiens (human) TNF*01 R-LIKE-DOMAIN TNF (Pr77-233) RPI TNF IMGT (202415-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, G, H
PF00229TNF(Tumour Necrosis Factor) family (TNF)TNF(Tumour Necrosis Factor) family- Domain
D, E, F, J, K
PF21584Poxvirus, 2L, N-terminal domain (2L_N_poxvirus)Poxvirus, 2L, N-terminal domainThis domain is found at the N-terminal end of 2L protein from Yaba-like disease virus (YLDV) and similar proteins from poxvirus. 2L binds tumour necrosis factor-alpha (TNFalpha) to inhibit host antiviral and immune responses. This entry represents th ...This domain is found at the N-terminal end of 2L protein from Yaba-like disease virus (YLDV) and similar proteins from poxvirus. 2L binds tumour necrosis factor-alpha (TNFalpha) to inhibit host antiviral and immune responses. This entry represents the alpha1- alpha2 superdomain which consists of an antiparallel beta-sheet that is topped by two alpha-helices. It shows similarity with the same domain in classical class I MHC molecules and MHC homologs (Pfam:PF00129) [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, G, H
Tumor necrosis factor
D, E, F, J, K
2L protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, G, H
IPR008983Tumour necrosis factor-like domain superfamilyHomologous Superfamily
A, B, C, G, H
IPR006053Tumour necrosis factorFamily
A, B, C, G, H
IPR002959Tumour necrosis factor alphaFamily
A, B, C, G, H
IPR021184Tumour necrosis factor, conserved siteConserved Site
A, B, C, G, H
IPR006052Tumour necrosis factor domainDomain
D, E, F, J, K
IPR049130Poxvirus, 2L, N-terminal domainDomain
D, E, F, J, K
IPR013783Immunoglobulin-like foldHomologous Superfamily
D, E, F, J, K
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
D, E, F, J, K
IPR007110Immunoglobulin-like domainDomain
D, E, F, J, K
IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B, C, G, H
PharosP01375