3E54

Archaeal Intron-encoded Homing Endonuclease I-Vdi141I Complexed With DNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00961e3e54A1 A: a+b two layersX: Homing endonucleases-likeH: Homing endonucleases (From Topology)T: Homing endonucleasesF: PF00961ECOD (1.6)
BPF00961e3e54B1 A: a+b two layersX: Homing endonucleases-likeH: Homing endonucleases (From Topology)T: Homing endonucleasesF: PF00961ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)
B3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00961LAGLIDADG endonuclease (LAGLIDADG_1)LAGLIDADG endonuclease- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
RRNA intron-encoded endonuclease - -
DNA (5'-D(*DCP*DTP*DGP*DAP*DCP*DTP*DCP*DTP*DCP*DTP*DTP*DAP*DA)-3')---
DNA (5'-D(P*DGP*DGP*DTP*DAP*DGP*DCP*DCP*DAP*DA)-3')---
DNA (5'-D(*DTP*DTP*DGP*DGP*DCP*DTP*DAP*DCP*DCP*DTP*DTP*DAP*DA)-3')---
DNA (5'-D(P*DGP*DAP*DGP*DAP*DGP*DTP*DCP*DAP*DG)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR004860Homing endonuclease, LAGLIDADGDomain
A, B
IPR027434Homing endonucleaseHomologous Superfamily