3AQJ
Crystal Structure of a C-terminal domain of the bacteriophage P2 tail spike protein, gpV
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth Q] | SCOP2B Superfamily | Phage fibre proteins | 8095956 | 3000351 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Phage fibre proteins | 8095956 | 3000351 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Phage fibre proteins | 8095956 | 3000351 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Phage fibre proteins | 8095956 | 3000351 | SCOP2B (2022-06-29) |
D [auth P] | SCOP2B Superfamily | Phage fibre proteins | 8095956 | 3000351 | SCOP2B (2022-06-29) |
F [auth R] | SCOP2B Superfamily | Phage fibre proteins | 8095956 | 3000351 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth Q] | Phage_Mu_Gp45 | e3aqjQ1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Phage_Mu_Gp45 | ECOD (1.6) |
A | Phage_Mu_Gp45 | e3aqjA1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Phage_Mu_Gp45 | ECOD (1.6) |
B | Phage_Mu_Gp45 | e3aqjB1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Phage_Mu_Gp45 | ECOD (1.6) |
C | Phage_Mu_Gp45 | e3aqjC1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Phage_Mu_Gp45 | ECOD (1.6) |
D [auth P] | Phage_Mu_Gp45 | e3aqjP1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Phage_Mu_Gp45 | ECOD (1.6) |
F [auth R] | Phage_Mu_Gp45 | e3aqjR1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: Phage_Mu_Gp45 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18715 | Phage spike trimer (Phage_spike) | Phage spike trimer | - | Repeat | |
PF18946 | GpV Apex motif (Apex) | GpV Apex motif | - | Motif |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006531 | Gp5/Type VI secretion system Vgr protein, OB-fold domain | Domain | |
IPR044033 | GpV-like, apex motif | Conserved Site | |
IPR013046 | Phage baseplate assembly protein V/Gp45 | Family | |
IPR037026 | Vgr protein, OB-fold domain superfamily | Homologous Superfamily | |
IPR040629 | Phage spike trimer | Domain |