Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2ehoa1 All alpha proteins GINS helical bundle-like GINS helical bundle-like SLD5 N-terminal domain-like GINS complex subunit 4, SLD5 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed2ehoe1 All alpha proteins GINS helical bundle-like GINS helical bundle-like SLD5 N-terminal domain-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed2ehoe2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id2ehoi1 All alpha proteins GINS helical bundle-like GINS helical bundle-like SLD5 N-terminal domain-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id2ehoi2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd2ehob1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF1 N-terminal domain-like DNA replication complex GINS protein PSF1 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd2ehof2 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF1 N-terminal domain-like DNA replication complex GINS protein PSF1 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd2ehof3 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd2ehoj_ All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF1 N-terminal domain-like DNA replication complex GINS protein PSF1 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd2ehoc1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF2 C-terminal domain-like DNA replication complex GINS protein PSF2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd2ehoc2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain PSF2 N-terminal domain-like DNA replication complex GINS protein PSF2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd2ehoc3 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd2ehok1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF2 C-terminal domain-like DNA replication complex GINS protein PSF2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd2ehok2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd2ehok3 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd2ehog1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF2 C-terminal domain-like DNA replication complex GINS protein PSF2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd2ehog2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd2ehog3 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd2ehod1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF3 C-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd2ehod2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain PSF3 N-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd2ehoh1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF3 C-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd2ehoh2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain PSF3 N-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld2ehol1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF3 C-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld2ehol2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain PSF3 N-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGINS helical bundle-like8033896 3001594 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGINS helical bundle-like8033896 3001594 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPriA/YqbF domain8033897 3000274 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGINS helical bundle-like8033896 3001594 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyPriA/YqbF domain8033897 3000274 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGINS helical bundle-like8033891 3001594 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGINS helical bundle-like8033891 3001594 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGINS helical bundle-like8033891 3001594 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGINS helical bundle-like8033892 3001594 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPriA/YqbF domain8033893 3000274 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyPriA/YqbF domain8033893 3000274 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGINS helical bundle-like8033892 3001594 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyPriA/YqbF domain8033893 3000274 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGINS helical bundle-like8033892 3001594 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPriA/YqbF domain8035319 3000274 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGINS helical bundle-like8035318 3001594 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyPriA/YqbF domain8035319 3000274 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGINS helical bundle-like8035318 3001594 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyPriA/YqbF domain8035319 3000274 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyGINS helical bundle-like8035318 3001594 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05916e2ehoA1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
EPF05916e2ehoE1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
EPF16922e2ehoE2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
IPF05916e2ehoI1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
IPF16922e2ehoI2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
BPF05916e2ehoB1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
FPF05916e2ehoF1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
JPF05916e2ehoJ1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
CPF05916e2ehoC1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
CF_UNCLASSIFIEDe2ehoC2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
KPF05916e2ehoK1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
KF_UNCLASSIFIEDe2ehoK2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
GPF05916e2ehoG1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
GF_UNCLASSIFIEDe2ehoG2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
DPF05916e2ehoD1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
DPF22466e2ehoD2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
HPF05916e2ehoH1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
HPF22466e2ehoH2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
LPF05916e2ehoL1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
LPF22466e2ehoL2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.58.1030 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
E1.20.58.1030 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
E3.40.5.60 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L9 domain 1CATH (4.3.0)
I1.20.58.1030 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
I3.40.5.60 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L9 domain 1CATH (4.3.0)
B1.20.58.1030 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
F1.20.58.1030 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
J1.20.58.1030 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
C3.40.5.50 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L9 domain 1CATH (4.3.0)
C1.20.58.1020 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
K3.40.5.50 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L9 domain 1CATH (4.3.0)
K1.20.58.1020 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
G3.40.5.50 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L9 domain 1CATH (4.3.0)
G1.20.58.1020 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
D1.20.58.2050 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
H1.20.58.2050 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
L1.20.58.2050 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, E, I
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
A, E, I
PF16922DNA replication complex GINS protein SLD5 C-terminus (SLD5_C)DNA replication complex GINS protein SLD5 C-terminusThe C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1].Domain
B, F, J
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
C, G, K
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
D, H, L
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E, I
GINS complex subunit 4-
B, F, J
DNA replication complex GINS protein PSF1-
C, G, K
DNA replication complex GINS protein PSF2-
D, H, L
GINS complex subunit 3-

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, E, I
PharosQ9BRT9
B, F, J
PharosQ14691
C, G, K
PharosQ9Y248
D, H, L
PharosQ9BRX5