2EB1
Crystal Structure of the C-Terminal RNase III Domain of Human Dicer
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF00636 | e2eb1C2 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: PF00636 | ECOD (1.6) |
A | PF00636,PF20932 | e2eb1A2 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: PF00636,PF20932 | ECOD (1.6) |
B | PF00636 | e2eb1B2 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: PF00636 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 1.10.1520.10 | Mainly Alpha | Orthogonal Bundle | Ribonuclease iii, N-terminal Endonuclease Domain | Chain A | CATH (4.3.0) |
A | 1.10.1520.10 | Mainly Alpha | Orthogonal Bundle | Ribonuclease iii, N-terminal Endonuclease Domain | Chain A | CATH (4.3.0) |
B | 1.10.1520.10 | Mainly Alpha | Orthogonal Bundle | Ribonuclease iii, N-terminal Endonuclease Domain | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00636 | Ribonuclease III domain (Ribonuclease_3) | Ribonuclease III domain | - | Family | |
PF20932 | Dicer, dsRNA-binding domain (Dicer_dsRBD) | Dicer, dsRNA-binding domain | This domain is found in Endoribonuclease Dicer from chordates. This dsRNA endoribonuclease is involved in the cleavage of long RNA precursors into short dsRNAs and plays a role in gene silencing. Dicer shows two N-terminal helicase domains (Pfam:PF04 ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR048513 | Dicer, partner-binding domain | Domain | |
IPR044441 | Dicer, double-stranded RNA-binding domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR006935 | Helicase/UvrB, N-terminal | Domain | |
IPR001650 | Helicase, C-terminal domain-like | Domain | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR005034 | Dicer dimerisation domain | Domain | |
IPR038248 | Dicer dimerisation domain superfamily | Homologous Superfamily | |
IPR000999 | Ribonuclease III domain | Domain | |
IPR003100 | PAZ domain | Domain | |
IPR048512 | Dicer, platform domain | Domain | |
IPR036389 | Ribonuclease III, endonuclease domain superfamily | Homologous Superfamily | |
IPR036085 | PAZ domain superfamily | Homologous Superfamily | |
IPR014720 | Double-stranded RNA-binding domain | Domain |