2CSE | pdb_00002cse

Features of Reovirus Outer-Capsid Protein mu1 Revealed by Electron and Image Reconstruction of the virion at 7.0-A Resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
U	d2cseu1	Low resolution protein structures	Reovirus components	Reovirus components	Reovirus components	outer-capsid protein mu1 and reovirus core	(Mammalian orthoreovirus 3 Dearing ) [TaxId: 10886 ],	SCOPe (2.08)
M [auth I]	d2csei1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
L [auth H]	d2cseh1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
K [auth G]	d2cseg1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
J [auth O]	d2cseo1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
I [auth N]	d2csen1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
H [auth M]	d2csem1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
G [auth F]	d2csef1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
F [auth E]	d2csee1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
E [auth D]	d2csed1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)
D [auth S]	d2cses1	Alpha and beta proteins (a+b)	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	Outer capsid protein sigma 3	(Mammalian orthoreovirus 1 Lang ) [TaxId: 10884 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
M [auth I]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
L [auth H]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
K [auth G]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
J [auth O]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
I [auth N]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
H [auth M]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
G [auth F]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
F [auth E]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
E [auth D]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
D [auth S]	SCOP2B Superfamily	Outer capsid protein sigma 3	8071741	3001282	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
S [auth L]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
S [auth L]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
R [auth K]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
R [auth K]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
Q [auth J]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
Q [auth J]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
P [auth R]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
P [auth R]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
O [auth Q]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
O [auth Q]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
N [auth P]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
N [auth P]	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Reovirus mu1 protein-like	8091411	3002506	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
AA [auth 1]	MIR	e2cse11	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: SAM/DNA-glycosylase	T: SAM domain-like	F: MIR	ECOD (v294.1)
Z	Sigma_1_2	e2cseZ1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Sigma_1_2	ECOD (v294.1)
Y	Sigma_1_2	e2cseY1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Sigma_1_2	ECOD (v294.1)
X	Sigma_1_2	e2cseX1	A: a/b three-layered sandwiches	X: Globin-like	H: Globin-like	T: Globin-like	F: Sigma_1_2	ECOD (v294.1)
W	UIM	e2cseW1	A: a/b three-layered sandwiches	X: PH domain-like	H: UIM domain	T: UIM domain	F: UIM	ECOD (v294.1)
V	PARP	e2cseV1	A: a/b three-layered sandwiches	X: Ribonuclease H-like	H: Ribonuclease H-like	T: Ribonuclease H-like	F: PARP	ECOD (v294.1)
U	preSET_CXC	e2cseU1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: Nucleotide-binding domain	F: preSET_CXC	ECOD (v294.1)
M [auth I]	RNA_pol_Rpb2_2	e2cseI1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
L [auth H]	RNA_pol_Rpb2_2	e2cseH1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
K [auth G]	RNA_pol_Rpb2_2	e2cseG1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
J [auth O]	RNA_pol_Rpb2_2	e2cseO1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
I [auth N]	RNA_pol_Rpb2_2	e2cseN1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
H [auth M]	RNA_pol_Rpb2_2	e2cseM1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
G [auth F]	RNA_pol_Rpb2_2	e2cseF1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
F [auth E]	RNA_pol_Rpb2_2	e2cseE1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
E [auth D]	RNA_pol_Rpb2_2	e2cseD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
D [auth S]	RNA_pol_Rpb2_2	e2cseS1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: RNA_pol_Rpb2_2	ECOD (v294.1)
T	Flavodoxin_2	e2cseT1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
S [auth L]	Flavodoxin_2	e2cseL1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
R [auth K]	Flavodoxin_2	e2cseK1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
Q [auth J]	Flavodoxin_2	e2cseJ1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
P [auth R]	Flavodoxin_2	e2cseR1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
O [auth Q]	Flavodoxin_2	e2cseQ1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
N [auth P]	Flavodoxin_2	e2cseP1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
C	Flavodoxin_2	e2cseC1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
B	Flavodoxin_2	e2cseB1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)
A	Flavodoxin_2	e2cseA1	A: a/b three-layered sandwiches	X: Anticodon-binding domain of Class II aaRS	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: Flavodoxin_2	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
V, W	PF22033	Inner capsid protein lambda-1/VP3 (Lamba1_VP3)	Inner capsid protein lambda-1/VP3	The reovirus inner capsid protein lambda-1 displays nucleoside triphosphate phosphohydrolase (NTPase),RNA-5'-triphosphatase (RTPase), and RNA helicase activity and may play a role in the transcription of the virus genome, the unwinding or reannealing ...	The reovirus inner capsid protein lambda-1 displays nucleoside triphosphate phosphohydrolase (NTPase),RNA-5'-triphosphatase (RTPase), and RNA helicase activity and may play a role in the transcription of the virus genome, the unwinding or reannealing of double-stranded RNA during RNA synthesis. Lambda1 is an Orthoreovirus core protein, VP3 is the homologous core protein in Aquareoviruses [1-4].	Domain
D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], I [auth N], J [auth O], K [auth G], L [auth H], M [auth I]	PF00979	Reovirus outer capsid protein, Sigma 3 (Reovirus_cap)	Reovirus outer capsid protein, Sigma 3	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth 1]	Minor core protein lambda 3	RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding nucleoside phosphate binding nucleotide binding RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	viral genome replication viral process viral life cycle	viral nucleocapsid viral capsid virion component
X, Y, Z	Sigma 2 protein	-	-	viral capsid icosahedral viral capsid virion component viral inner capsid
V, W	major core protein lambda 1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity cation binding transition metal ion binding zinc ion binding metal ion binding	7-methylguanosine mRNA capping RNA metabolic process primary metabolic process 7-methylguanosine RNA capping RNA capping gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process 7-methylguanosine mRNA capping RNA metabolic process primary metabolic process 7-methylguanosine RNA capping RNA capping gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 5'-end processing metabolic process cellular process RNA processing macromolecule metabolic process	viral capsid icosahedral viral capsid virion component viral inner capsid T=2 icosahedral viral capsid
U	guanylyltransferase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding guanylyltransferase activity mRNA guanylyltransferase activity RNA guanylyltransferase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid transferase activity catalytic activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups RNA methyltransferase activity transferase activity, transferring one-carbon groups S-adenosylmethionine-dependent methyltransferase activity mRNA 5'-cap (guanine-N7-)-methyltransferase activity N-methyltransferase activity methyltransferase activity mRNA methyltransferase activity guanyl nucleotide binding GTP binding guanyl ribonucleotide binding	-	viral capsid icosahedral viral capsid virion component viral outer capsid
D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], I [auth N], J [auth O], K [auth G], L [auth H], M [auth I]	major capsid surface protein sigma-3	enzyme regulator activity protein kinase inhibitor activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity protein kinase regulator activity protein serine/threonine kinase inhibitor activity kinase inhibitor activity kinase regulator activity structural molecule activity cation binding transition metal ion binding zinc ion binding ion binding enzyme regulator activity protein kinase inhibitor activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity protein kinase regulator activity protein serine/threonine kinase inhibitor activity kinase inhibitor activity kinase regulator activity structural molecule activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding RNA binding nucleic acid binding	symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host defenses symbiont-mediated suppression of host PKR/eIFalpha signaling symbiont-mediated response to host defenses response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated perturbation of host process symbiont-mediated suppression of host-directed shutoff of host translation symbiont-mediated suppression of host defenses symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host defenses symbiont-mediated suppression of host PKR/eIFalpha signaling symbiont-mediated response to host defenses response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated perturbation of host process symbiont-mediated suppression of host-directed shutoff of host translation symbiont-mediated suppression of host defenses response to host response to external biotic stimulus symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host immune response symbiont-mediated perturbation of host innate immune response viral process viral life cycle symbiont-mediated suppression of host interferon-mediated signaling pathway symbiont-mediated suppression of host type I interferon-mediated signaling pathway	viral capsid icosahedral viral capsid virion component viral outer capsid
A, B, C, N [auth P], O [auth Q], A, B, C, N [auth P], O [auth Q], P [auth R], Q [auth J], R [auth K], S [auth L], T	major outer-capsid protein mu1	host cell surface binding binding	symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms symbiont entry into host cell via permeabilization of host membrane viral life cycle symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host membrane symbiont entry into host cell viral process symbiont entry into host disruption of anatomical structure in another organism	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell mitochondrion viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell mitochondrion viral capsid virion component host cell plasma membrane host cell membrane icosahedral viral capsid viral outer capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth 1]	IPR007097	RNA-directed RNA polymerase, reovirus	Domain
AA [auth 1]	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
AA [auth 1]	IPR012915	Reovirus RNA-dependent RNA polymerase lambda 3	Family
X, Y, Z	IPR004317	Sigma1/sigma2, reoviral	Family
V, W	IPR044949	Inner capsid protein lambda-1/ VP3 superfamily	Homologous Superfamily
V, W	IPR013087	Zinc finger C2H2-type	Domain
V, W	IPR054176	Inner capsid protein lambda-1/VP3	Domain
U	IPR048601	Reovirus core-spike protein lambda-2-like, GTase domain	Domain
U	IPR048602	Reovirus core-spike protein lambda-2-like, 7th domain	Domain
U	IPR048604	Reovirus core-spike protein lambda-2-like, ferredoxin-like domain	Domain
U	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
U	IPR048598	Reovirus core-spike protein lambda-2-like, first methyltransferase domain	Domain
U	IPR048596	Reovirus core-spike protein lambda-2-like, N-terminal domain	Domain
U	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
U	IPR048603	Reovirus core-spike protein lambda-2-like, 6th domain	Domain
U	IPR010311	Reovirus core-spike lambda-2	Family
U	IPR048597	Reovirus core-spike protein lambda-2-like, second methyltransferase domain	Domain
U	IPR048294	Reovirus core-spike protein lambda-2-like, C-terminal domain	Domain
D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], I [auth N], J [auth O], K [auth G], L [auth H], M [auth I]	IPR000153	Reovirus, outer capsid sigma 3	Family
D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], D [auth S], E [auth D], F [auth E], G [auth F], H [auth M], I [auth N], J [auth O], K [auth G], L [auth H], M [auth I]	IPR023634	Reovirus, outer capsid sigma-3 domain superfamily	Homologous Superfamily
A, B, C, N [auth P], O [auth Q], A, B, C, N [auth P], O [auth Q], P [auth R], Q [auth J], R [auth K], S [auth L], T	IPR015961	Mu1 membrane penetration protein, domain I	Homologous Superfamily
A, B, C, N [auth P], O [auth Q], A, B, C, N [auth P], O [auth Q], P [auth R], Q [auth J], R [auth K], S [auth L], T	IPR015960	Mu1 membrane penetration protein, domain IV	Homologous Superfamily
A, B, C, N [auth P], O [auth Q], A, B, C, N [auth P], O [auth Q], P [auth R], Q [auth J], R [auth K], S [auth L], T	IPR036256	Mu1/VP4 superfamily	Homologous Superfamily
A, B, C, N [auth P], O [auth Q], A, B, C, N [auth P], O [auth Q], P [auth R], Q [auth J], R [auth K], S [auth L], T	IPR009113	Outer capsid protein Mu1/VP4	Family
A, B, C, N [auth P], O [auth Q], A, B, C, N [auth P], O [auth Q], P [auth R], Q [auth J], R [auth K], S [auth L], T	IPR015962	Mu1 membrane penetration protein, domain II	Homologous Superfamily
A, B, C, N [auth P], O [auth Q], A, B, C, N [auth P], O [auth Q], P [auth R], Q [auth J], R [auth K], S [auth L], T	IPR044937	Mu1 membrane penetration protein, domain III	Homologous Superfamily