2APH
Crystal structure of human PGRP-IalphaC in complex with muramyl pentapeptide
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Protein Modification Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2apha_ | Alpha and beta proteins (a+b) | N-acetylmuramoyl-L-alanine amidase-like | N-acetylmuramoyl-L-alanine amidase-like | N-acetylmuramoyl-L-alanine amidase-like | Peptidoglycan recognition protein I-alpha | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2aphb_ | Alpha and beta proteins (a+b) | N-acetylmuramoyl-L-alanine amidase-like | N-acetylmuramoyl-L-alanine amidase-like | N-acetylmuramoyl-L-alanine amidase-like | Peptidoglycan recognition protein I-alpha | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Amidase_2 | e2aphA1 | A: a+b three layers | X: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | H: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | T: N-acetylmuramoyl-L-alanine amidase-like | F: Amidase_2 | ECOD (1.6) |
B | Amidase_2 | e2aphB1 | A: a+b three layers | X: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | H: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | T: N-acetylmuramoyl-L-alanine amidase-like | F: Amidase_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.80.10 | Alpha Beta | 3-Layer(aba) Sandwich | Lysozyme-like | Peptidoglycan recognition protein-like | CATH (4.3.0) |
B | 3.40.80.10 | Alpha Beta | 3-Layer(aba) Sandwich | Lysozyme-like | Peptidoglycan recognition protein-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01510 | N-acetylmuramoyl-L-alanine amidase (Amidase_2) | N-acetylmuramoyl-L-alanine amidase | This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002502 | N-acetylmuramoyl-L-alanine amidase domain | Domain | |
IPR006619 | Peptidoglycan recognition protein family domain, metazoa/bacteria | Domain | |
IPR036505 | N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily | Homologous Superfamily | |
IPR015510 | Peptidoglycan recognition protein | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q96LB9 | : 
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
DAL | AA0111 , AA0191 :  meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 | :  |
GMA | Parent Component: GLU :  AA0111 , AA0191 | |
NH2 | AA0111 , AA0191 , AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 :  meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109 | :