1Z1C
Structural Determinants of Tissue Tropism and In Vivo Pathogenicity for the Parvovirus Minute virus of Mice
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1z1ca1 | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | ssDNA viruses | Parvoviridae-like VP | Parvovirus (panleukopenia virus) capsid protein | (Murine minute virus (STRAIN MVMI) ) [TaxId: 10795 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | ssDNA viruses | 8040864 | 3000931 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | Parvo_coat | e1z1cA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Parvo_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 2.170.30.10 | Mainly Beta | Beta Complex | Empty Capsid Viral Protein 2 | Parvovirus coat protein VP1/VP2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF00740 | Parvovirus coat protein VP2 (Parvo_coat) | Parvovirus coat protein VP2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR013607 | Phospholipase A2-like domain | Domain |
C [auth A] | IPR016184 | Capsid/spike protein, ssDNA virus | Homologous Superfamily |
C [auth A] | IPR036952 | Parvovirus coat protein VP1/VP2 | Homologous Superfamily |
C [auth A] | IPR001403 | Parvovirus coat protein VP2 | Domain |