1VPX

Crystal structure of Transaldolase (EC 2.2.1.2) (TM0295) from Thermotoga maritima at 2.40 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1vpxa1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
A	d1vpxa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
B	d1vpxb1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
B	d1vpxb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
C	d1vpxc1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
C	d1vpxc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
D	d1vpxd1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
D	d1vpxd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
E	d1vpxe1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
E	d1vpxe2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
F	d1vpxf1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
F	d1vpxf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
G	d1vpxg1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
G	d1vpxg2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
H	d1vpxh1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
H	d1vpxh2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
I	d1vpxi1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
I	d1vpxi2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
J	d1vpxj1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
J	d1vpxj2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
K	d1vpxk1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
K	d1vpxk2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
L	d1vpxl1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
L	d1vpxl2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
M	d1vpxm1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
M	d1vpxm2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
N	d1vpxn1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
N	d1vpxn2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
O	d1vpxo1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
O	d1vpxo2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
P	d1vpxp1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
P	d1vpxp2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
Q	d1vpxq1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
Q	d1vpxq2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
R	d1vpxr1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
R	d1vpxr2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
S	d1vpxs1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
S	d1vpxs2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
T	d1vpxt1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	Class I aldolase	Decameric fructose-6-phosphate aldolase/transaldolase	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)
T	d1vpxt2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima ) [TaxId: 2336 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
F	SCOP2 Family	Class I aldolase	8030837	4003216	SCOP2 (2022-06-29)
F	SCOP2 Superfamily	Aldolase	8043216	3000445	SCOP2 (2022-06-29)
G	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Aldolase	8043216	3000445	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00923	e1vpxA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
B	PF00923	e1vpxB1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
C	PF00923	e1vpxC1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
D	PF00923	e1vpxD1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
E	PF00923	e1vpxE1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
F	PF00923	e1vpxF1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
G	PF00923	e1vpxG1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
H	PF00923	e1vpxH1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
I	PF00923	e1vpxI1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
J	PF00923	e1vpxJ1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
K	PF00923	e1vpxK1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
L	PF00923	e1vpxL1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
M	PF00923	e1vpxM1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
N	PF00923	e1vpxN1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
O	PF00923	e1vpxO1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
P	PF00923	e1vpxP1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
Q	PF00923	e1vpxQ1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
R	PF00923	e1vpxR1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
S	PF00923	e1vpxS1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)
T	PF00923	e1vpxT1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00923	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
B	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
C	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
D	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
E	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
F	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
G	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
H	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
I	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
J	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
K	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
L	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
M	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
N	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
O	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
P	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
Q	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
R	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
S	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
T	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	PF00923	Transaldolase/Fructose-6-phosphate aldolase (TAL_FSA)	Transaldolase/Fructose-6-phosphate aldolase	Transaldolase (TAL) is an enzyme of the pentose phosphate pathway (PPP) found almost ubiquitously in the three domains of life (Archaea, Bacteria, and Eukarya). TAL shares a high degree of structural similarity and sequence identity with fructose-6-p ...	Transaldolase (TAL) is an enzyme of the pentose phosphate pathway (PPP) found almost ubiquitously in the three domains of life (Archaea, Bacteria, and Eukarya). TAL shares a high degree of structural similarity and sequence identity with fructose-6-phosphate aldolase (FSA). They both belong to the class I aldolase family[4]. Their protein structures have been revealed[5].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	PROTEIN (Transaldolase (EC 2.2.1.2))	transketolase or transaldolase activity transaldolase activity transferase activity catalytic activity lyase activity carbon-carbon lyase activity aldehyde-lyase activity	carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative metabolic process glucose 6-phosphate metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process nucleobase-containing small molecule metabolic process pentose-phosphate shunt phosphate-containing compound metabolic process pyridine-containing compound metabolic process small molecule metabolic process phosphorus metabolic process carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative metabolic process glucose 6-phosphate metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process nucleobase-containing small molecule metabolic process pentose-phosphate shunt phosphate-containing compound metabolic process pyridine-containing compound metabolic process small molecule metabolic process phosphorus metabolic process pyridine nucleotide metabolic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process organonitrogen compound metabolic process cellular metabolic process generation of precursor metabolites and energy nucleotide metabolic process purine-containing compound metabolic process NADP metabolic process organic cyclic compound metabolic process NADPH regeneration organophosphate metabolic process cellular process	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR004731	Transaldolase type 3B/Fructose-6-phosphate aldolase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR022999	Transaldolase type 3B, putative	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR018225	Transaldolase, active site	Active Site
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR033919	Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR001585	Transaldolase/Fructose-6-phosphate aldolase	Family