Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1q3sa1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Ad1q3sa2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Ad1q3sa3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Bd1q3sb1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Bd1q3sb2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Bd1q3sb3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Cd1q3sc1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Cd1q3sc2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Cd1q3sc3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Dd1q3sd1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Dd1q3sd2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Dd1q3sd3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Ed1q3se1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Ed1q3se2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Ed1q3se3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Fd1q3sf1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Fd1q3sf2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Fd1q3sf3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Gd1q3sg1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Gd1q3sg2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Gd1q3sg3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Hd1q3sh1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like Group II chaperonin (CCT, TRIC), ATPase domain Thermosome, E domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Hd1q3sh2 Alpha and beta proteins (a/b) The 'swivelling' beta/beta/alpha domain GroEL apical domain-like Group II chaperonin (CCT, TRIC), apical domain Thermosome, A-domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)
Hd1q3sh3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like Group II chaperonin (CCT, TRIC), intermediate domain Thermosome, I domain (Thermococcus sp. JCM 11816 ) [TaxId: 1295125 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL-intermediate domain like8039627 3001087 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL apical domain-like8039624 3000963 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroEL equatorial domain-like8039621 3001651 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACpn60_TCP1_1ste1q3sA1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ACpn60_TCP1_2nde1q3sA3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
ACpn60_TCP1_2nd_1e1q3sA2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
BCpn60_TCP1_1ste1q3sB1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
BCpn60_TCP1_2nde1q3sB3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
BCpn60_TCP1_2nd_1e1q3sB2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
CCpn60_TCP1_1ste1q3sC1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
CCpn60_TCP1_2nde1q3sC3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
CCpn60_TCP1_2nd_1e1q3sC2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
DCpn60_TCP1_1ste1q3sD1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
DCpn60_TCP1_2nde1q3sD3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
DCpn60_TCP1_2nd_1e1q3sD2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
ECpn60_TCP1_1ste1q3sE1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ECpn60_TCP1_2nde1q3sE3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
ECpn60_TCP1_2nd_1e1q3sE2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
FCpn60_TCP1_1ste1q3sF1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
FCpn60_TCP1_2nde1q3sF3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
FCpn60_TCP1_2nd_1e1q3sF2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
GCpn60_TCP1_1ste1q3sG1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
GCpn60_TCP1_2nde1q3sG3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
GCpn60_TCP1_2nd_1e1q3sG2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
HCpn60_TCP1_1ste1q3sH1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
HCpn60_TCP1_2nde1q3sH3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
HCpn60_TCP1_2nd_1e1q3sH2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
A3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
A3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
B1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
B3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
B3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
C1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
C3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
C3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
D1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
D3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
D3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
E1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
E3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
E3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
F1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
F3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
F3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
G1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
G3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
G3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
H1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
H3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
H3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)Family
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002194Chaperonin TCP-1, conserved siteConserved Site
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR012714Thermosome, archaealFamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
chaperonin ATPase  M-CSA #179

Chaperonins are essential multisubunit assemblies that promote facilitated protein folding in concert with ATP hydrolysis - forming a 'cage' around the protein as it folds, with the 'timer' for protein release provided by ATP hydrolysis. Group II chaperonins are found in archaea and the eukaryotic cytosol. The mechanism for ATP hydrolysis of all chaperonins is the same, but the way this is linked to opening and closing of the cavity is different.

Defined by 4 residues: ASP:A-64THR:A-97THR:A-98ASP:A-393
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Explore in 3DM-CSA Motif Definition