1PK8
Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Synapsin C-terminal domain | 8026462 | 4002060 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Synapsin domain | 8026459 | 4003882 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | PreATP-grasp domain | 8038838 | 3001680 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Glutathione synthetase ATP-binding domain-like | 8038841 | 3000094 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RimK | e1pk8A1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
A | Synapsin | e1pk8A2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
B | RimK | e1pk8B1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
B | Synapsin | e1pk8B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
C | RimK | e1pk8C1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
C | Synapsin | e1pk8C2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
D | RimK | e1pk8D1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
D | Synapsin | e1pk8D2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
E | RimK | e1pk8E1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
E | Synapsin | e1pk8E2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
F | RimK | e1pk8F1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
F | Synapsin | e1pk8F2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
G | RimK | e1pk8G1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
G | Synapsin | e1pk8G2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
H | RimK | e1pk8H1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: RimK | ECOD (1.6) |
H | Synapsin | e1pk8H2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: PreATP-grasp domain | F: Synapsin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02078 | Synapsin, N-terminal domain (Synapsin) | Synapsin, N-terminal domain | This family is structurally related to the PreATP-grasp domain. | Domain | |
PF02750 | Synapsin, ATP binding domain (Synapsin_C) | Synapsin, ATP binding domain | Ca dependent ATP binding in this ATP grasp fold. Function unknown. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001359 | Synapsin | Family | |
IPR020897 | Synapsin, pre-ATP-grasp domain | Domain | |
IPR019736 | Synapsin, phosphorylation site | PTM | |
IPR013815 | ATP-grasp fold, subdomain 1 | Homologous Superfamily | |
IPR016185 | Pre-ATP-grasp domain superfamily | Homologous Superfamily | |
IPR019735 | Synapsin, conserved site | Conserved Site | |
IPR020898 | Synapsin, ATP-binding domain | Domain |