1PD3

Influenza A NEP M1-binding domain

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1pd3a_	All alpha proteins	ROP-like	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	(Influenza A virus ) [TaxId: 11320 ],	SCOPe (2.08)
B	d1pd3b_	All alpha proteins	ROP-like	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	(Influenza A virus ) [TaxId: 11320 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Nonstructural protein ns2 Nep M1-binding domain	8026175	4000647	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Nonstructural protein ns2 Nep M1-binding domain	8038554	3000875	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Nonstructural protein ns2 Nep M1-binding domain	8038554	3000875	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00601	e1pd3A1	A: alpha duplicates or obligate multimers	X: ROP-like	H: Nonstructural protein ns2, Nep, M1-binding domain (From Topology)	T: Nonstructural protein ns2, Nep, M1-binding domain	F: PF00601	ECOD (1.6)
B	PF00601	e1pd3B1	A: alpha duplicates or obligate multimers	X: ROP-like	H: Nonstructural protein ns2, Nep, M1-binding domain (From Topology)	T: Nonstructural protein ns2, Nep, M1-binding domain	F: PF00601	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.287.230	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
B	1.10.287.230	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00601	Influenza non-structural protein (NS2) (Flu_NS2)	Influenza non-structural protein (NS2)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Nonstructural protein NS2	-	exit from host cell biological process involved in interspecies interaction between organisms exit of virus from host cell nucleus through nuclear pore exit of virus from host cell nucleus biological process involved in interaction with host biological process involved in symbiotic interaction	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle virion component extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR000968	Influenza nuclear export protein NS2	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.