1P6D

STRUCTURE OF THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS IN COMPLEX WITH (3S)-3,4,DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1p6da_	All alpha proteins	Phospholipase C/P1 nuclease	Phospholipase C/P1 nuclease	Phospholipase C	Bacterial phosholipase C	(Bacillus cereus ) [TaxId: 1396 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Phospholipase C/P1 nuclease	8038761	3001513	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Zn_dep_PLPC	e1p6dA1	A: alpha bundles	X: Phospholipase C/P1 nuclease (From Topology)	H: Phospholipase C/P1 nuclease (From Topology)	T: Phospholipase C/P1 nuclease	F: Zn_dep_PLPC	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.575.10	Mainly Alpha	Orthogonal Bundle	P1 Nuclease	P1 Nuclease	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00882	Zinc dependent phospholipase C (Zn_dep_PLPC)	Zinc dependent phospholipase C	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	PHOSPHOLIPASE C	phosphoric ester hydrolase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity phosphatidylcholine phospholipase C activity phospholipase C activity hydrolase activity catalytic activity phospholipase activity lipase activity cation binding transition metal ion binding zinc ion binding ion binding binding phosphoric ester hydrolase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity phosphatidylcholine phospholipase C activity phospholipase C activity hydrolase activity catalytic activity phospholipase activity lipase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	biological process involved in interspecies interaction between organisms cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism cell killing	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008947	Phospholipase C/P1 nuclease domain superfamily	Homologous Superfamily
A	IPR029002	Phospholipase C/D	Domain
A	IPR001531	Zinc-dependent phospholipase C	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM	Monotopic/peripheral	All alpha monotopic/peripheral	Phospholipase C/P1 nuclease	Zinc dependent phospholipase C

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.