1OFC
nucleosome recognition module of ISWI ATPase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | d1ofcx1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Myb/SANT domain | SANT domain of the nucleosome remodeling ATPase ISWI | FRUIT FLY (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
A [auth X] | d1ofcx2 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | SLIDE domain | SLIDE domain of the nucleosome remodeling ATPase ISWI | FRUIT FLY (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
A [auth X] | d1ofcx3 | All alpha proteins | HAND domain of the nucleosome remodeling ATPase ISWI | HAND domain of the nucleosome remodeling ATPase ISWI | HAND domain of the nucleosome remodeling ATPase ISWI | HAND domain of the nucleosome remodeling ATPase ISWI | FRUIT FLY (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth X] | SCOP2 Family | SLIDE domain | 8002281 | 4000244 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Family | Myb/SANT domain | 8002284 | 4000317 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Family | HAND domain-like | 8002285 | 4000312 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | Homeodomain-like | 8002282 | 3000001 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | Homeodomain-like | 8017608 | 3000001 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | HAND domain-like | 8002286 | 3000088 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | F_UNCLASSIFIED | e1ofcX2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth X] | PF09111 | e1ofcX3 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF09111 | ECOD (1.6) |
A [auth X] | PF09110 | e1ofcX1 | A: alpha arrays | X: HAND domain of the nucleosome remodeling ATPase ISWI (From Topology) | H: HAND domain of the nucleosome remodeling ATPase ISWI (From Topology) | T: HAND domain of the nucleosome remodeling ATPase ISWI | F: PF09110 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 1.10.1040.30 | Mainly Alpha | Orthogonal Bundle | N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase | domain 2 | CATH (4.3.0) |
A [auth X] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
A [auth X] | 1.20.5.1190 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | iswi atpase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF09110 | HAND (HAND) | HAND | The HAND domain adopts a secondary structure consisting of four alpha helices, three of which (H2, H3, H4) form an L-like configuration. Helix H2 runs antiparallel to helices H3 and H4, packing closely against helix H4, whilst helix H1 reposes in the ... | Domain |
A [auth X] | PF09111 | SLIDE (SLIDE) | SLIDE | The SLIDE domain adopts a secondary structure comprising a main core of three alpha-helices. It has a role in DNA binding, contacting DNA target sites similar to c-Myb (Pfam:PF00249) repeats or homeodomains [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X] | IPR000330 | SNF2, N-terminal | Domain |
A [auth X] | IPR015195 | SLIDE domain | Domain |
A [auth X] | IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |
A [auth X] | IPR036306 | ISWI, HAND domain superfamily | Homologous Superfamily |
A [auth X] | IPR049730 | SNF2/RAD5-like, C-terminal helicase domain | Domain |
A [auth X] | IPR015194 | ISWI, HAND domain | Domain |
A [auth X] | IPR038718 | SNF2-like, N-terminal domain superfamily | Homologous Superfamily |
A [auth X] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
A [auth X] | IPR001650 | Helicase, C-terminal domain-like | Domain |
A [auth X] | IPR044754 | Isw1/2, N-terminal | Domain |
A [auth X] | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain |
A [auth X] | IPR017884 | SANT domain | Domain |
A [auth X] | IPR001005 | SANT/Myb domain | Domain |