Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1ny6a_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Cd1ny6c_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Dd1ny6d_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Ed1ny6e_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Bd1ny6b_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Fd1ny6f_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Gd1ny6g_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Hd1ny6h_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Id1ny6i_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Jd1ny6j_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Kd1ny6k_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Ld1ny6l_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Md1ny6m_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)
Nd1ny6n_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C-terminal domain (Aquifex aeolicus ) [TaxId: 63363 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyRecA-like P-loop NTPases8037077 3002019 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyDNA polymerases epsilon N-terminal domain (Dpoe2NT)-like8104150 3002834 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe1ny6A1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
APF00158e1ny6A2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
CF_UNCLASSIFIEDe1ny6C1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
CPF00158e1ny6C2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
DF_UNCLASSIFIEDe1ny6D1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
DPF00158e1ny6D2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
EF_UNCLASSIFIEDe1ny6E1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
EPF00158e1ny6E2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
BF_UNCLASSIFIEDe1ny6B1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
BPF00158e1ny6B2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
FF_UNCLASSIFIEDe1ny6F1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
FPF00158e1ny6F2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
GF_UNCLASSIFIEDe1ny6G1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
GPF00158e1ny6G2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
HF_UNCLASSIFIEDe1ny6H1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
HPF00158e1ny6H2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
IF_UNCLASSIFIEDe1ny6I1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
IPF00158e1ny6I2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
JF_UNCLASSIFIEDe1ny6J1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
JPF00158e1ny6J2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
KF_UNCLASSIFIEDe1ny6K1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
KPF00158e1ny6K2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
LF_UNCLASSIFIEDe1ny6L1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
LPF00158e1ny6L2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
MF_UNCLASSIFIEDe1ny6M1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
MPF00158e1ny6M2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)
NF_UNCLASSIFIEDe1ny6N1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
NPF00158e1ny6N2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00158ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
A1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
C3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
C1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
D3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
D1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
E3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
E1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
B3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
B1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
F3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
F1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
G3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
G1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
H3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
H1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
I3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
I1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
J3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
J1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
K3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
K1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
L3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
L1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
M3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
M1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
N3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
N1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00158Sigma-54 interaction domain (Sigma54_activat)Sigma-54 interaction domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
transcriptional regulator (NtrC family) -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011006CheY-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR002197DNA binding HTH domain, Fis-typeDomain
A, B, C, D, E
IPR001789Signal transduction response regulator, receiver domainDomain
A, B, C, D, E
IPR002078RNA polymerase sigma factor 54 interaction domainDomain
A, B, C, D, E
IPR009057Homeobox-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR025662Sigma-54 interaction domain, ATP-binding site 1Binding Site
A, B, C, D, E
IPR003593AAA+ ATPase domainDomain
A, B, C, D, E
IPR025943Sigma-54 interaction domain, ATP-binding site 2Binding Site
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily