1NLX

Crystal Structure of PHL P 6, A Major Timothy Grass Pollen Allergen Co-Crystallized with Zinc

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1nlxa_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
B	d1nlxb_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
C	d1nlxc_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
D	d1nlxd_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
E	d1nlxe_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
F	d1nlxf_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
G	d1nlxg_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
H	d1nlxh_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
I	d1nlxi_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
J	d1nlxj_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
K	d1nlxk_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
L	d1nlxl_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
M	d1nlxm_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
N	d1nlxn_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Group V grass pollen allergen	8031496	4002306	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Pollen_allerg_2	e1nlxA1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
B	Pollen_allerg_2	e1nlxB1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
C	Pollen_allerg_2	e1nlxC1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
D	Pollen_allerg_2	e1nlxD1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
E	Pollen_allerg_2	e1nlxE1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
F	Pollen_allerg_2	e1nlxF1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
G	Pollen_allerg_2	e1nlxG1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
H	Pollen_allerg_2	e1nlxH1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
I	Pollen_allerg_2	e1nlxI1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
J	Pollen_allerg_2	e1nlxJ1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
K	Pollen_allerg_2	e1nlxK1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
L	Pollen_allerg_2	e1nlxL1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
M	Pollen_allerg_2	e1nlxM1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)
N	Pollen_allerg_2	e1nlxN1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen (From Topology)	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
B	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
C	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
D	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
E	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
F	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
G	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
H	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
I	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
J	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
K	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
L	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
M	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
N	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	PF01620	Ribonuclease (pollen allergen) (Pollen_allerg_2)	Ribonuclease (pollen allergen)	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR002914	Pollen allergen Poa p IX/Phl p VI	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR035506	Pollen allergen/Uncharacterized protein Os	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.