1N3F
Crystal structure of I-CreI bound to a palindromic DNA sequence II (palindrome of right side of wildtype DNA target sequence)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth A] | d1n3fa_ | Alpha and beta proteins (a+b) | Homing endonuclease-like | Homing endonucleases | Group I mobile intron endonuclease | DNA endonuclease I-CreI | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
J [auth B] | d1n3fb_ | Alpha and beta proteins (a+b) | Homing endonuclease-like | Homing endonucleases | Group I mobile intron endonuclease | DNA endonuclease I-CreI | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
K [auth G] | d1n3fg_ | Alpha and beta proteins (a+b) | Homing endonuclease-like | Homing endonucleases | Group I mobile intron endonuclease | DNA endonuclease I-CreI | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
L [auth H] | d1n3fh_ | Alpha and beta proteins (a+b) | Homing endonuclease-like | Homing endonucleases | Group I mobile intron endonuclease | DNA endonuclease I-CreI | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth A] | SCOP2B Superfamily | Homing endonucleases | 8032709 | 3000266 | SCOP2B (2022-06-29) |
J [auth B] | SCOP2B Superfamily | Homing endonucleases | 8032709 | 3000266 | SCOP2B (2022-06-29) |
K [auth G] | SCOP2B Superfamily | Homing endonucleases | 8032709 | 3000266 | SCOP2B (2022-06-29) |
L [auth H] | SCOP2B Superfamily | Homing endonucleases | 8032709 | 3000266 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth A] | PF00961 | e1n3fA1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF00961 | ECOD (1.6) |
J [auth B] | PF00961 | e1n3fB1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF00961 | ECOD (1.6) |
K [auth G] | PF00961 | e1n3fG1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF00961 | ECOD (1.6) |
L [auth H] | PF00961 | e1n3fH1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF00961 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
I [auth A] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
J [auth B] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
K [auth G] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
L [auth H] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
I [auth A], J [auth B], K [auth G], L [auth H] | PF00961 | LAGLIDADG endonuclease (LAGLIDADG_1) | LAGLIDADG endonuclease | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth C], C [auth E], E [auth I], G [auth K] | 5'-D(*CP*GP*AP*AP*AP*CP*TP*GP*TP*CP*TP*CP*GP*A)-3' | - | - | - |
B [auth D], D [auth F], F [auth J], H [auth L] | 5'-D(P*GP*AP*CP*AP*GP*TP*TP*TP*CP*G-3') | - | - | - |
I [auth A], J [auth B], K [auth G], L [auth H] | DNA endonuclease I-CreI |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
I [auth A], J [auth B], K [auth G], L [auth H] | IPR004860 | Homing endonuclease, LAGLIDADG | Domain |
I [auth A], J [auth B], K [auth G], L [auth H] | IPR027434 | Homing endonuclease | Homologous Superfamily |