1N1C

Crystal Structure Of The Dimeric TorD Chaperone From Shewanella Massilia

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1n1ca1	All alpha proteins	TorD-like	TorD-like	TorD-like	TorA specific chaperone TorD	(Shewanella massilia ) [TaxId: 76854 ],	SCOPe (2.08)
A	d1n1ca2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shewanella massilia ) [TaxId: 76854 ],	SCOPe (2.08)
B	d1n1cb1	All alpha proteins	TorD-like	TorD-like	TorD-like	TorA specific chaperone TorD	(Shewanella massilia ) [TaxId: 76854 ],	SCOPe (2.08)
B	d1n1cb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Shewanella massilia ) [TaxId: 76854 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	TorD-like	8020616	4003842	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	TorD-like	8032996	3001633	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	TorD-like	8032996	3001633	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02613	e1n1cA1	A: alpha bundles	X: TorD-like (Pfam 06192) (From Topology)	H: TorD-like (Pfam 06192) (From Topology)	T: TorD-like (Pfam 06192)	F: PF02613	ECOD (1.6)
B	PF02613	e1n1cB1	A: alpha bundles	X: TorD-like (Pfam 06192) (From Topology)	H: TorD-like (Pfam 06192) (From Topology)	T: TorD-like (Pfam 06192)	F: PF02613	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.120.1820	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)		CATH (4.3.0)
A	1.20.1280.20	Mainly Alpha	Up-down Bundle	Monooxygenase	HscB, C-terminal domain	CATH (4.3.0)
B	1.20.120.1820	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)		CATH (4.3.0)
B	1.20.1280.20	Mainly Alpha	Up-down Bundle	Monooxygenase	HscB, C-terminal domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02613	Nitrate reductase delta subunit (Nitrate_red_del)	Nitrate reductase delta subunit	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	TorA specific chaperone	-	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process protein metabolic process macromolecule metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR020945	DMSO/Nitrate reductase chaperone	Family
A, B	IPR023069	Chaperone TorD	Family
A, B	IPR036386	HscB, C-terminal domain superfamily	Homologous Superfamily
A, B	IPR036411	TorD-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.