1LQ1
DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation Bacteria
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
H [auth D] | d1lq1d_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | C-terminal effector domain of the bipartite response regulators | Spo0A | Spo0A | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
E [auth A] | d1lq1a_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | C-terminal effector domain of the bipartite response regulators | Spo0A | Spo0A | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
F [auth B] | d1lq1b_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | C-terminal effector domain of the bipartite response regulators | Spo0A | Spo0A | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
G [auth C] | d1lq1c_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | C-terminal effector domain of the bipartite response regulators | Spo0A | Spo0A | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
H [auth D] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8041426 | 3001179 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8041426 | 3001179 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8041426 | 3001179 | SCOP2B (2022-06-29) |
G [auth C] | SCOP2 Family | Spo0A | 8029047 | 4000726 | SCOP2 (2022-06-29) |
G [auth C] | SCOP2 Superfamily | C-terminal effector domain of the bipartite response regulators | 8041426 | 3001179 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
H [auth D] | PF08769 | e1lq1D1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: PF08769 | ECOD (1.6) |
E [auth A] | PF08769 | e1lq1A1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: PF08769 | ECOD (1.6) |
F [auth B] | PF08769 | e1lq1B1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: PF08769 | ECOD (1.6) |
G [auth C] | PF08769 | e1lq1C1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: PF08769 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
H [auth D] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
E [auth A] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
F [auth B] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
G [auth C] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth A], F [auth B], G [auth C], H [auth D] | PF08769 | Sporulation initiation factor Spo0A C terminal (Spo0A_C) | Sporulation initiation factor Spo0A C terminal | The response regulator Spo0A is comprised of a phophoacceptor domain and a transcription activation domain. This domain corresponds to the transcription activation domain and forms an alpha helical structure comprising of 6 alpha helices. The struc ... | Domain |