Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Gd1lnug1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC alpha chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Gd1lnug2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1lnua1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC alpha chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1lnua2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Cd1lnuc1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC alpha chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Cd1lnuc2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed1lnue1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC alpha chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed1lnue2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Dd1lnud1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC beta chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Dd1lnud2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Hd1lnuh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC beta chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Hd1lnuh2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd1lnub1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC beta chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd1lnub2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd1lnuf1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC beta chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd1lnuf2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
GSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054687 3000071 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMHC antigen-recognition domain8043807 3000521 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054687 3000071 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMHC antigen-recognition domain8043807 3000521 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054687 3000071 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMHC antigen-recognition domain8043807 3000521 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyMHC antigen-recognition domain8043807 3000521 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054687 3000071 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054723 3000071 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMHC antigen-recognition domain8043808 3000521 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054723 3000071 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyMHC antigen-recognition domain8043808 3000521 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMHC antigen-recognition domain8043808 3000521 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054723 3000071 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyMHC antigen-recognition domain8043808 3000521 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054723 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GPF07654e1lnuG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
GPF00993e1lnuG2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00993ECOD (1.6)
APF07654e1lnuA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
APF00993e1lnuA2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00993ECOD (1.6)
CPF07654e1lnuC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
CPF00993e1lnuC2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00993ECOD (1.6)
EPF07654e1lnuE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
EPF00993e1lnuE2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00993ECOD (1.6)
DPF07654e1lnuD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
DPF00969e1lnuD2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00969ECOD (1.6)
HPF07654e1lnuH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
HPF00969e1lnuH2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00969ECOD (1.6)
BPF07654e1lnuB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
BPF00969e1lnuB2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00969ECOD (1.6)
FPF07654e1lnuF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
FPF00969e1lnuF2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00969ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
G2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
H3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
H2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
F3.10.320.10 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain Chain B, domain 1CATH (4.3.0)
F2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, C, E, G
Major Histocompatibility II (MH2) II-ALPHA Mus musculus (house mouse) MH2-AA G-DOMAIN G-ALPHA, C-LIKE-DOMAIN C-LIKE MH MH2-ALPHA_BETA-PEPTIDE IMGT (202416-0)
B, D, F, H
Major Histocompatibility II (MH2) II-BETA-PEPTIDE Mus musculus (house mouse) H2-AB1*01 G-DOMAIN G-BETA MH MH2-ALPHA_BETA-PEPTIDE IMGT (202416-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain
A, C, E, G
PF00993Class II histocompatibility antigen, alpha domain (MHC_II_alpha)Class II histocompatibility antigen, alpha domain- Domain
B, D, F, H
PF00969Class II histocompatibility antigen, beta domain (MHC_II_beta)Class II histocompatibility antigen, beta domain- Domain
B, D, F, H
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G
H-2 class II histocompatibility antigen, A-B alpha chain
B, D, F, H
H-2 class II histocompatibility antigen, A beta chain