1FIU
TETRAMERIC RESTRICTION ENDONUCLEASE NGOMIV IN COMPLEX WITH CLEAVED DNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth A] | d1fiua_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease NgoIV | Restriction endonuclease NgoIV | (Neisseria gonorrhoeae ) [TaxId: 485 ], | SCOPe (2.08) |
J [auth B] | d1fiub_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease NgoIV | Restriction endonuclease NgoIV | (Neisseria gonorrhoeae ) [TaxId: 485 ], | SCOPe (2.08) |
K [auth C] | d1fiuc_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease NgoIV | Restriction endonuclease NgoIV | (Neisseria gonorrhoeae ) [TaxId: 485 ], | SCOPe (2.08) |
L [auth D] | d1fiud_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease NgoIV | Restriction endonuclease NgoIV | (Neisseria gonorrhoeae ) [TaxId: 485 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth A] | SCOP2 Family | Restriction endonuclease NgoIV | 8032062 | 4000487 | SCOP2 (2022-06-29) |
I [auth A] | SCOP2 Superfamily | Restriction endonuclease-like | 8044440 | 3000104 | SCOP2 (2022-06-29) |
J [auth B] | SCOP2B Superfamily | Restriction endonuclease-like | 8044440 | 3000104 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | Restriction endonuclease-like | 8044440 | 3000104 | SCOP2B (2022-06-29) |
L [auth D] | SCOP2B Superfamily | Restriction endonuclease-like | 8044440 | 3000104 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth A] | PF09015 | e1fiuA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PF09015 | ECOD (1.6) |
J [auth B] | PF09015 | e1fiuB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PF09015 | ECOD (1.6) |
K [auth C] | PF09015 | e1fiuC1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PF09015 | ECOD (1.6) |
L [auth D] | PF09015 | e1fiuD1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PF09015 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
I [auth A] | 3.40.50.10010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Type-2 restriction enzyme NgoMIV | CATH (4.3.0) |
J [auth B] | 3.40.50.10010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Type-2 restriction enzyme NgoMIV | CATH (4.3.0) |
K [auth C] | 3.40.50.10010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Type-2 restriction enzyme NgoMIV | CATH (4.3.0) |
L [auth D] | 3.40.50.10010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Type-2 restriction enzyme NgoMIV | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
I [auth A], J [auth B], K [auth C], L [auth D] | PF09015 | NgoMIV restriction enzyme (NgoMIV_restric) | NgoMIV restriction enzyme | Members of this family are prokaryotic DNA restriction enzymes, exhibiting an alpha/beta structure, with a central region comprising a mixed six-stranded beta-sheet with alpha-helices on each side. A long 'arm' protrudes out of the core of the domain ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
I [auth A], J [auth B], K [auth C], L [auth D] | IPR015105 | Type-2 restriction enzyme NgoMIV | Family |
I [auth A], J [auth B], K [auth C], L [auth D] | IPR037083 | Type-2 restriction enzyme NgoMIV superfamily | Homologous Superfamily |
I [auth A], J [auth B], K [auth C], L [auth D] | IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily |