1EI7
TMV COAT PROTEIN REFINED FROM THE 4-LAYER AGGREGATE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1ei7a_ | All alpha proteins | Four-helical up-and-down bundle | TMV-like viral coat proteins | TMV-like viral coat proteins | Tobacco mosaic virus coat protein | (Tobacco mosaic virus ) [TaxId: 12242 ], | SCOPe (2.08) |
B | d1ei7b_ | All alpha proteins | Four-helical up-and-down bundle | TMV-like viral coat proteins | TMV-like viral coat proteins | Tobacco mosaic virus coat protein | (Tobacco mosaic virus ) [TaxId: 12242 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | TMV-like viral coat proteins | 8024538 | 4000823 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TMV-like viral coat proteins | 8036917 | 3001587 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | TMV-like viral coat proteins | 8036917 | 3001587 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00721 | e1ei7A1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: TMV-like viral coat proteins (From Topology) | T: TMV-like viral coat proteins | F: PF00721 | ECOD (1.6) |
B | PF00721 | e1ei7B1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: TMV-like viral coat proteins (From Topology) | T: TMV-like viral coat proteins | F: PF00721 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.70 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Tobacco mosaic virus-like, coat protein | CATH (4.3.0) |
B | 1.20.120.70 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Tobacco mosaic virus-like, coat protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00721 | Virus coat protein (TMV like) (TMV_coat) | Virus coat protein (TMV like) | This family contains coat proteins from tobamoviruses, hordeiviruses, Tobraviruses, Furoviruses and Potyviruses. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
COAT PROTEIN | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001337 | Tobacco mosaic virus-like, coat protein | Family | |
IPR036417 | Tobacco mosaic virus-like, coat protein superfamily | Homologous Superfamily |