1E07

Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF07686	e1e07A1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
A	PF13895	e1e07A3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF13895	ECOD (1.6)
A	PF13927	e1e07A7	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF13927	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07686	Immunoglobulin V-set domain (V-set)	Immunoglobulin V-set domain	This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.	Domain
A	PF13927	Immunoglobulin domain (Ig_3)	Immunoglobulin domain	This family contains immunoglobulin-like domains.	Domain
A	PF13895	Immunoglobulin domain (Ig_2)	Immunoglobulin domain	This domain contains immunoglobulin-like domains.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	CARCINOEMBRYONIC ANTIGEN	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity lipid binding phospholipid binding GPI anchor binding glycolipid binding carbohydrate derivative binding phosphatidylinositol binding	regulation of biological process regulation of cellular process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process cellular process apoptotic process programmed cell death cell adhesion regulation of biological process regulation of cellular process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process cellular process apoptotic process programmed cell death cell adhesion cell-cell adhesion cell-cell adhesion via plasma-membrane adhesion molecules homophilic cell adhesion via plasma membrane adhesion molecules homotypic cell-cell adhesion regulation of anoikis negative regulation of anoikis anoikis heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules regulation of developmental process cellular developmental process negative regulation of muscle cell differentiation regulation of cell differentiation regulation of striated muscle cell differentiation muscle cell differentiation myotube differentiation muscle structure development negative regulation of myotube differentiation cell differentiation regulation of myotube differentiation anatomical structure development negative regulation of cell differentiation developmental process negative regulation of developmental process negative regulation of striated muscle cell differentiation regulation of muscle cell differentiation striated muscle cell differentiation	membrane cellular anatomical entity side of membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle membrane cellular anatomical entity side of membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle cell surface basal part of cell basal plasma membrane basolateral plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A	IPR003599	Immunoglobulin subtype	Domain
A	IPR003598	Immunoglobulin subtype 2	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR013106	Immunoglobulin V-set domain	Domain
A	IPR007110	Immunoglobulin-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P06731	cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia Abortion, Spontaneous breast cancer ductal breast carcinoma in situ lung carcinoma nasopharyngeal carcinoma pancreatic intraductal papillary-mucinous carcinoma breast carcinoma cystic fibrosis lung adenocarcinoma lung disease non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm asthma cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia Abortion, Spontaneous breast cancer ductal breast carcinoma in situ lung carcinoma nasopharyngeal carcinoma pancreatic intraductal papillary-mucinous carcinoma breast carcinoma cystic fibrosis lung adenocarcinoma lung disease non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm asthma breast disease digestive system disease lung cancer malignant pancreatic neoplasm pancreatic ductal adenocarcinoma

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.