4LDD
Crystal Structure of Ebola virus VP40 Hexamer
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth C] | SCOP2B Superfamily | EV matrix protein-like | 8044506 | 3000219 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | EV matrix protein-like | 8044506 | 3000219 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | EV matrix protein-like | 8044506 | 3000219 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth C] | VP40_N | e4lddC1 | A: beta barrels | X: EV matrix protein (From Homology) | H: EV matrix protein | T: EV matrix protein | F: VP40_N | ECOD (1.6) |
C [auth A] | VP40_N | e4lddA1 | A: beta barrels | X: EV matrix protein (From Homology) | H: EV matrix protein | T: EV matrix protein | F: VP40_N | ECOD (1.6) |
A [auth B] | VP40_C | e4lddB2 | A: beta barrels | X: EV matrix protein (From Homology) | H: EV matrix protein | T: EV matrix protein | F: VP40_C | ECOD (1.6) |
A [auth B] | VP40_N | e4lddB1 | A: beta barrels | X: EV matrix protein (From Homology) | H: EV matrix protein | T: EV matrix protein | F: VP40_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth C] | 2.70.20.20 | Mainly Beta | Distorted Sandwich | Topoisomerase I | domain 3 | CATH (4.3.0) |
C [auth A] | 2.70.20.20 | Mainly Beta | Distorted Sandwich | Topoisomerase I | domain 3 | CATH (4.3.0) |
A [auth B] | 2.70.20.20 | Mainly Beta | Distorted Sandwich | Topoisomerase I | domain 3 | CATH (4.3.0) |
A [auth B] | 2.60.510.10 | Mainly Beta | Sandwich | EV matrix protein fold | EV matrix protein | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth C], C [auth A] | IPR043079 | EV matrix protein, N-terminal | Homologous Superfamily |
A [auth B], B [auth C], C [auth A] | IPR008986 | EV matrix protein | Family |
A [auth B], B [auth C], C [auth A] | IPR038057 | EV matrix domain superfamily | Homologous Superfamily |
A [auth B], B [auth C], C [auth A] | IPR035092 | EV matrix protein, C-terminal | Homologous Superfamily |