4G2K
Crystal structure of the Marburg Virus GP2 ectodomain in its post-fusion conformation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4g2ka_ | Coiled coil proteins | Stalk segment of viral fusion proteins | Virus ectodomain | automated matches | automated matches | yeast, Marburg virus (Saccharomyces cerevisiae ) [TaxId: 4932 ], yeast, Marburg virus (Lake Victoria marburgvirus - Popp ) [TaxId: 33728 ], | SCOPe (2.08) |
B | d4g2kb_ | Coiled coil proteins | Stalk segment of viral fusion proteins | Virus ectodomain | automated matches | automated matches | yeast, Marburg virus (Saccharomyces cerevisiae ) [TaxId: 4932 ], yeast, Marburg virus (Lake Victoria marburgvirus - Popp ) [TaxId: 33728 ], | SCOPe (2.08) |
C | d4g2kc_ | Coiled coil proteins | Stalk segment of viral fusion proteins | Virus ectodomain | automated matches | automated matches | yeast, Marburg virus (Saccharomyces cerevisiae ) [TaxId: 4932 ], yeast, Marburg virus (Lake Victoria marburgvirus - Popp ) [TaxId: 33728 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Leucine zipper-like | 8037025 | 3001609 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Virus ectodomain | 8071650 | 3001628 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Virus ectodomain | 8071649 | 4003841 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Virus ectodomain | 8071650 | 3001628 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Leucine zipper-like | 8037025 | 3001609 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Virus ectodomain | 8071650 | 3001628 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Leucine zipper-like | 8037025 | 3001609 | SCOP2B (2022-06-29) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.210 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
B | 1.10.287.210 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
C | 1.10.287.210 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22307 | Envelope glycoprotein GP2-like, HR1-HR2 (Ebola-like_HR1-HR2) | Envelope glycoprotein GP2-like, HR1-HR2 | This entry spans heptad repeats 1 and 2 of the glycoprotein (GP) from Ebola and Marburg viruses [1-5]. Viral infection involves the formation of a trimer-of-hairpins structure (three HR1s helices, buttressed by three HR2 helices lying in antiparallel ... | Domain | |
PF07716 | Basic region leucine zipper (bZIP_2) | Basic region leucine zipper | - | Coiled-coil |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004827 | Basic-leucine zipper domain | Domain | |
IPR050946 | AP-1 Transcription Factor bZIP | Family | |
IPR046347 | Basic-leucine zipper domain superfamily | Homologous Superfamily | |
IPR018154 | TLV/ENV coat polyprotein | Family | |
IPR014625 | Filoviruses glycoprotein | Family | |
IPR002561 | Filoviruses glycoprotein, extracellular domain | Domain |